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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 21
First Previous 1-21 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_26059_g04f 2012 5' Spike at flowering date 446bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform3[Brachypodiumdistachyon] 203 1.38338e-50
whr_5088_m06f 2012 5' Root 102bp Contig13914       abcisicacid-inducibleproteinkinanase[OryzasativaIndicaGroup] 57 1.19641e-06
whrd_10015_a01f 2012 5' Root of dessiccated seed 616bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 289 5.57251e-76
whxa_6021_k05f 2012 5' Root 410bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.72678e-45
whxe_7062_d16f 2012 5' Seedling, infected with leaf rust 668bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 312 5.82148e-83
whxe_2043_e09f 2012 5' Seedling, infected with leaf rust 683bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 328 1.39379e-87
whxe_6011_f01f 2012 5' Seedling, infected with leaf rust 661bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 339 5.60772e-91
whxe_12072_i19f 2012 5' Seedling, infected with leaf rust 604bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 277 2.09741e-72
whxf_40053_l14f 2012 5' Seedling, infected with leaf rust 470bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform3[Brachypodiumdistachyon] 189 2.68908e-46
whxg_25047_b09f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 468bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.75076e-45
whxh_26017_p05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 607bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.81019e-21
HX054963 whxn_12062_d15f 2012 5' Leaves, plant was grown at constant 23 602bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.45818e-67
HX056551 whxn_26076_e19f 2012 5' Leaves, plant was grown at constant 23 549bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 279 2.43793e-73
HX089385 whxp_28045_d09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 615bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 409 3.74752e-112
HX121412 whxq_30003_n02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 621bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 413 2.04308e-113
HX121413 whxq_31003_n02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 349bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 230 1.80184e-58
HX178617 whxt_15052_m15f 2012 5' Roots, 18 day old plants were grown hydroponically 750bp Contig13914       predictedprotein[Hordeumvulgaresubsp.vulgare] 461 9.89279e-128
HX196067 whxu_28021_l05f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 732bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 400 1.96134e-109
HX196464 whxu_25053_l13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 636bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 339 5.07365e-91
HX199602 whxu_27017_o05f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 636bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 339 5.07365e-91
whxv_1093_d22f 2012 5' Leaves, plant was grown at constant 23 711bp Contig13914       PREDICTED:serine/threonine-proteinkinaseSAPK2-likeisoform1[Brachypodiumdistachyon] 339 6.64374e-91
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