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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 73
First Previous 1-73 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_18035_m10f 2012 5' Seed DPA20 484bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.10331e-23
whdp_18035_m10r 2012 3' Seed DPA20 438bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.09856e-23
whei_5015_b01f 2012 5' Dormant seed with water absorption after breaking 461bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.10387e-23
whei_5015_b01r 2012 3' Dormant seed with water absorption after breaking 428bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.16896e-23
whei_2007_j02f 2012 5' Dormant seed with water absorption after breaking 430bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 110 1.5842e-22
whei_2007_j02r 2012 3' Dormant seed with water absorption after breaking 402bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19006e-23
whei_10084_n24f 2012 5' Dormant seed with water absorption after breaking 389bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12021e-23
whei_10084_n24r 2012 3' Dormant seed with water absorption after breaking 395bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.22428e-23
whem_14078_c19f 2012 5' Dormant seed with water absorption 365bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.11197e-23
whem_14078_c19r 2012 3' Dormant seed with water absorption 322bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19076e-23
whem_19043_e09f 2012 5' Dormant seed with water absorption 456bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12196e-23
whem_19043_e09r 2012 3' Dormant seed with water absorption 440bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.09856e-23
whem_13037_k10f 2012 5' Dormant seed with water absorption 450bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.17623e-23
whem_13037_k10r 2012 3' Dormant seed with water absorption 417bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.1045e-23
whem_6054_k16f 2012 5' Dormant seed with water absorption 365bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.11197e-23
whem_6054_k16r 2012 3' Dormant seed with water absorption 332bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.14382e-23
whkv_3094_c24r 2012 3' Shoot grown with continuous light after cold treatment 488bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19222e-23
whkv_7027_f05f 2012 5' Shoot grown with continuous light after cold treatment 449bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.17623e-23
whkv_7027_f05r 2012 3' Shoot grown with continuous light after cold treatment 492bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15408e-23
whkv_8027_f05r 2012 3' Shoot grown with continuous light after cold treatment 261bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 89 4.98174e-16
whms_15031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 474bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15904e-23
whms_15031_a05r 2012 3' Seed DPA5 of DT3DL CS wheat 453bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15814e-23
whok_20089_g21f 2012 5' Seed DPA5 464bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21478e-23
whok_20089_g21r 2012 3' Seed DPA5 449bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.17623e-23
whpc_15040_i11f 2012 5' Anther at meiosis 464bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21478e-23
whpc_15040_i11r 2012 3' Anther at meiosis 443bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21241e-23
whpc_15088_i24f 2012 5' Anther at meiosis 462bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21478e-23
whpc_15088_i24r 2012 3' Anther at meiosis 440bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.09856e-23
whsl_21047_l03f 2012 5' Seed DPA30 406bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 83 2.07582e-14
whsl_21046_l03r 2012 3' Seed DPA30 415bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12161e-23
whsl_22088_n06f 2012 5' Seed DPA30 40bp Contig13419            
whsl_23088_n06f 2012 5' Seed DPA30 64bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 43 0.0200821
whsl_21048_o03f 2012 5' Seed DPA30 57bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 37 1.61111
whsp_11046_d11f 2012 5' 437bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 86 2.41872e-15
whsp_11046_d11r 2012 3' 429bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.16896e-23
whv3_14004_n03f 2012 5' Shoot grown under cold condition for 3days 536bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.86833e-23
whv3_14004_n03r 2012 3' Shoot grown under cold condition for 3days 481bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.10331e-23
whva_9089_c24f 2012 5' Shoot with ABA treatment 184bp Contig13419       hypotheticalproteinMemar_1272[MethanoculleusmarisnigriJR1] 35 8.6068
whva_9089_c24r 2012 3' Shoot with ABA treatment 146bp Contig13419       hypotheticalproteinOsI_21437[OryzasativaIndicaGroup] 54 1.37315e-05
whva_1047_o15f 2012 5' Shoot with ABA treatment 512bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.16281e-23
whva_1047_o15r 2012 3' Shoot with ABA treatment 465bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.1962e-23
whvd_8085_k21f 2012 5' Shoot grown with dessication 495bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15408e-23
whvd_8085_k21r 2012 3' Shoot grown with dessication 479bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12189e-23
whxa_4042_g12f 2012 5' Root 309bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12043e-23
whxa_4042_g12r 2012 3' Root 277bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.13419e-23
whxb_39094_c24r 2012 3' Root 370bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21995e-23
whxc_3005_k01f 2012 5' Root, treated at 50 microM Al for 6h 384bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.13684e-23
whxc_4005_k01f 2012 5' Root, treated at 50 microM Al for 6h 384bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.13684e-23
whxc_6005_k01f 2012 5' Root, treated at 50 microM Al for 6h 321bp Contig13419       hypotheticalproteinOsI_21438[OryzasativaIndicaGroup] 69 3.11515e-10
whxc_3005_k01r 2012 3' Root, treated at 50 microM Al for 6h 360bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.14424e-23
whxc_4005_k01r 2012 3' Root, treated at 50 microM Al for 6h 346bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.22491e-23
whxc_6005_k01r 2012 3' Root, treated at 50 microM Al for 6h 43bp Contig13419            
whxc_33049_p13f 2012 5' Root, treated at 50 microM Al for 6h 285bp Contig13419       hypotheticalproteinMemar_1272[MethanoculleusmarisnigriJR1] 35 6.56612
whxd_34034_p11f 2012 5' Root, treated at 50 microM Al for 6h 446bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19432e-23
whxd_34034_p11r 2012 3' Root, treated at 50 microM Al for 6h 412bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 110 1.56621e-22
whxh_14057_g14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 233bp Contig13419       PDZdomain-containingproteinMAGIX[Macacamulatta] 35 6.49494
whxh_6073_h17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 129bp Contig13419       hypotheticalproteinOsI_21437[OryzasativaIndicaGroup] 48 0.000736837
whxh_2021_l05f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 107bp Contig13419            
whxh_1021_l05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 129bp Contig13419            
whxh_2021_l05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 213bp Contig13419            
HX050218 whxn_24016_a04f 2012 5' Leaves, plant was grown at constant 23 464bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21478e-23
HX050219 whxn_25016_a04f 2012 5' Leaves, plant was grown at constant 23 253bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 44 0.0136976
HX050244 whxn_24016_a04r 2012 3' Leaves, plant was grown at constant 23 446bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19432e-23
HX096528 whxp_4040_i11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 468bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.1962e-23
HX096559 whxp_4040_i11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 431bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15136e-23
HX140250 whxr_2003_n01f 2012 5' Roots, 18 day old plants were grown hydroponically 400bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 83 2.09285e-14
HX140274 whxr_2003_n01r 2012 3' Roots, 18 day old plants were grown hydroponically 435bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.11616e-23
HX141589 whxr_23002_o04f 2012 5' Roots, 18 day old plants were grown hydroponically 509bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.18237e-23
HX141613 whxr_23002_o04r 2012 3' Roots, 18 day old plants were grown hydroponically 487bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19222e-23
HX154150 whxs_24072_i19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 468bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.1962e-23
HX154176 whxs_24072_i19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 462bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21478e-23
whyd_6055_j04f 2012 5' Spikelet at late flowering 369bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.21995e-23
whyd_6054_j04r 2012 3' Spikelet at late flowering 362bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.12811e-23
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