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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 296
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_16076_e19f 2012 5' Callus 704bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 295 1.07819e-77
whcs_16076_e19r 2012 3' Callus 773bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 1.06066e-79
whcs_5091_f21f 2012 5' Callus 705bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 2.24491e-115
whcs_5091_f21r 2012 3' Callus 747bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.53329e-107
whdl_13091_g06f 2012 5' Crown of seedling 625bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.81214e-94
whdl_13091_g06r 2012 3' Crown of seedling 366bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 3.71051e-32
whdl_17037_i03f 2012 5' Crown of seedling 192bp Contig133       PREDICTED:enolase-like[Brachypodiumdistachyon] 129 4.35123e-28
whdl_10071_j11r 2012 3' Crown of seedling 448bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.19398e-56
whdl_6029_k20f 2012 5' Crown of seedling 50bp Contig133       PREDICTED:enolase-like[Brachypodiumdistachyon] 36 3.19038
whdp_3031_a05r 2012 3' Seed DPA20 573bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 6.7658e-96
whe_1068_f11f 2012 5' Seed DPA10 589bp Contig133       PREDICTED:enolase-like[Brachypodiumdistachyon] 375 4.0938e-102
whe_3080_p05r 2012 3' Seed DPA10 489bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.39778e-57
whe_23016_p13f 2012 5' Seed DPA10 574bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.25231e-91
whei_8029_d06f 2012 5' Dormant seed with water absorption after breaking 533bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 3.95028e-94
whei_8029_d06r 2012 3' Dormant seed with water absorption after breaking 615bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 5.75329e-81
whem_17007_j01f 2012 5' Dormant seed with water absorption 440bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 4.3891e-17
whem_17007_j01r 2012 3' Dormant seed with water absorption 432bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.52441e-25
whem_9066_p20r 2012 3' Dormant seed with water absorption 100bp Contig133       unknown[Medicagotruncatula] 68 8.87865e-10
whf_8081_a06r 2012 3' Spike at flowering date 410bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 3.04806e-42
whf_1018_a20f 2012 5' Spike at flowering date 468bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 2.33895e-82
whf_1018_a20r 2012 3' Spike at flowering date 488bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.39778e-57
whf_17065_a23f 2012 5' Spike at flowering date 474bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 2.41015e-63
whf_17065_a23r 2012 3' Spike at flowering date 388bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 3.47183e-38
whf_18066_a23r 2012 3' Spike at flowering date 52bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 34 9.86274
whkp_1080_b19f 2012 5' Shoot grown under continuous light 329bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 4.45433e-17
whkp_1080_b19r 2012 3' Shoot grown under continuous light 294bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 1.53531e-25
whkp_7059_e13f 2012 5' Shoot grown under continuous light 379bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.12253e-60
whkp_7059_e13r 2012 3' Shoot grown under continuous light 721bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 3.14871e-104
whkp_17068_n19f 2012 5' Shoot grown under continuous light 673bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 446 2.57059e-123
whkp_17068_n19r 2012 3' Shoot grown under continuous light 654bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 6.87687e-110
whkv_13027_f06f 2012 5' Shoot grown with continuous light after cold treatment 609bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 402 3.35936e-110
whkv_13027_f06r 2012 3' Shoot grown with continuous light after cold treatment 695bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.92504e-96
whkv_2043_f09f 2012 5' Shoot grown with continuous light after cold treatment 660bp Contig133       germin-likeprotein2[Triticumaestivum] 404 1.08683e-110
whkv_2043_f09r 2012 3' Shoot grown with continuous light after cold treatment 683bp Contig133       germin-likeprotein2[Triticumaestivum] 323 4.48366e-86
whkv_7058_h16f 2012 5' Shoot grown with continuous light after cold treatment 655bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 435 5.6126e-120
whkv_7058_h16r 2012 3' Shoot grown with continuous light after cold treatment 695bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.23962e-96
whkv_16037_l10f 2012 5' Shoot grown with continuous light after cold treatment 696bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 3.01293e-109
whkv_16037_l10r 2012 3' Shoot grown with continuous light after cold treatment 718bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.176e-95
whkv_11004_n03f 2012 5' Shoot grown with continuous light after cold treatment 686bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 452 3.79311e-125
whkv_11004_n03r 2012 3' Shoot grown with continuous light after cold treatment 691bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.08811e-95
whkv_20033_o10f 2012 5' Shoot grown with continuous light after cold treatment 58bp Contig133       PREDICTED:enolase-like[Brachypodiumdistachyon] 41 0.0654102
whms_11080_a19f 2012 5' Seed DPA5 of DT3DL CS wheat 625bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 2.40281e-61
whms_11080_a19r 2012 3' Seed DPA5 of DT3DL CS wheat 588bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.59905e-66
whms_13045_d10f 2012 5' Seed DPA5 of DT3DL CS wheat 560bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.13418e-100
whms_13045_d10r 2012 3' Seed DPA5 of DT3DL CS wheat 618bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 2.00563e-81
whms_5028_e08f 2012 5' Seed DPA5 of DT3DL CS wheat 611bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.64485e-97
whms_5028_e08r 2012 3' Seed DPA5 of DT3DL CS wheat 622bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 2.06212e-81
whms_9087_j21f 2012 5' Seed DPA5 of DT3DL CS wheat 638bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.96699e-66
whoh_25045_k21r 2012 3' Pistil at heading date 63bp Contig133       unknown[Medicagotruncatula] 43 0.0249791
whok_18074_h19f 2012 5' Seed DPA5 666bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 398 1.04146e-108
whok_18074_h19r 2012 3' Seed DPA5 659bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.21002e-85
whok_16056_i16f 2012 5' Seed DPA5 719bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 475 6.02924e-132
whok_16056_i16r 2012 3' Seed DPA5 694bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.21605e-96
whok_12053_l13f 2012 5' Seed DPA5 670bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 7.26109e-110
whok_12053_l13r 2012 3' Seed DPA5 693bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.21605e-96
whpc_11091_e21f 2012 5' Anther at meiosis 659bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 436 3.37067e-120
whpc_11091_e21r 2012 3' Anther at meiosis 725bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.21093e-95
whr_24009_c07f 2012 5' Root 615bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.75281e-91
whr_24009_c07r 2012 3' Root 432bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 3.05736e-42
whr_23025_c08f 2012 5' Root 202bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 139 4.15012e-31
whr_23025_c08r 2012 3' Root 467bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.40101e-57
whr_1013_h07f 2012 5' Root 498bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 2.14234e-88
whr_1012_h07r 2012 3' Root 419bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.64483e-51
whr_14038_j09f 2012 5' Root 532bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 1.7732e-94
whr_14038_j09r 2012 3' Root 501bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.33597e-57
whr_12029_k02f 2012 5' Root 603bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 6.61567e-87
whr_12029_k02r 2012 3' Root 479bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.34078e-57
whr_12062_l04f 2012 5' Root 496bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.15852e-66
whr_24008_n07f 2012 5' Root 476bp Contig133       Enolase,putative,expressed[OryzasativaJaponicaGroup] 251 7.45871e-65
whrd_13037_k10f 2012 5' Root of dessiccated seed 629bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 3.04512e-96
whrd_13037_k10r 2012 3' Root of dessiccated seed 638bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 4.21489e-85
whrd_17035_m10f 2012 5' Root of dessiccated seed 553bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 367 9.24578e-100
whrd_17035_m10r 2012 3' Root of dessiccated seed 631bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 2.35876e-56
whrd_13051_m14f 2012 5' Root of dessiccated seed 580bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 8.85906e-91
whrd_13051_m14r 2012 3' Root of dessiccated seed 620bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.04215e-85
whrd_11050_o16f 2012 5' Root of dessiccated seed 587bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 382 4.30443e-104
whrd_11050_o16r 2012 3' Root of dessiccated seed 602bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.86438e-81
whsc_20080_a19f 2012 5' Shoot grown with cold treatment 593bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 3.80534e-63
whsc_18073_g18f 2012 5' Shoot grown with cold treatment 586bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 7.37638e-88
whsc_18073_g18r 2012 3' Shoot grown with cold treatment 594bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.07839e-77
whsc_17067_n17f 2012 5' Shoot grown with cold treatment 506bp Contig133       PREDICTED:enolase-like[Brachypodiumdistachyon] 339 2.11347e-91
whsc_17067_n17r 2012 3' Shoot grown with cold treatment 594bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 295 7.25495e-78
whsd_9073_g17f 2012 5' Shoot grown with dessication 586bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 1.94115e-88
whsd_9073_g17r 2012 3' Shoot grown with dessication 634bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.0112e-83
whsd_17052_m15f 2012 5' Shoot grown with dessication 607bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.76091e-96
whsd_17052_m15r 2012 3' Shoot grown with dessication 602bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 7.79675e-96
whsh_2042_d15f 2012 5' - 529bp Contig133       germin-likeprotein2[Triticumaestivum] 328 4.13835e-88
whva_20081_o22f 2012 5' Shoot with ABA treatment 422bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 7.40386e-28
whva_20081_o22r 2012 3' Shoot with ABA treatment 385bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 3.74794e-32
whvd_12087_j21f 2012 5' Shoot grown with dessication 694bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 461 8.34321e-128
whvd_12087_j21r 2012 3' Shoot grown with dessication 690bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.08811e-95
whvd_6051_m13f 2012 5' Shoot grown with dessication 701bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 458 5.5805e-127
whvd_6051_m13r 2012 3' Shoot grown with dessication 633bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.08037e-85
whvd_6051_m14f 2012 5' Shoot grown with dessication 624bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.61883e-110
whvd_6051_m14r 2012 3' Shoot grown with dessication 396bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 3.55128e-46
whvd_6003_n01f 2012 5' Shoot grown with dessication 667bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 439 3.12123e-121
whvd_6003_n01r 2012 3' Shoot grown with dessication 524bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 6.34268e-70
whvd_6003_n02r 2012 3' Shoot grown with dessication 75bp Contig133       enolase[Papilioxuthus] 53 2.89658e-05
whvh_2031_a06f 2012 5' Shoot with heat shock treatment 688bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 3.22599e-108
whvh_2031_a06r 2012 3' Shoot with heat shock treatment 689bp Contig133       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 4.13482e-95
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