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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 23
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_5090_g24f 2012 5' Seed DPA20 70bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 51 0.000105484
whdp_5090_g24r 2012 3' Seed DPA20 523bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 267 1.0819e-69
whpc_14025_h05f 2012 5' Anther at meiosis 761bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 353 3.00894e-95
whpc_14025_h05r 2012 3' Anther at meiosis 773bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 366 3.50641e-99
whsc_2016_a03r 2012 3' Shoot grown with cold treatment 530bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 217 1.75488e-54
whva_10066_b05f 2012 5' Shoot with ABA treatment 517bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 262 4.46072e-68
whva_10066_b05r 2012 3' Shoot with ABA treatment 537bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 294 1.1798e-77
whvd_15019_m06r 2012 3' Shoot grown with dessication 328bp Contig13057       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.33489e-56
whvd_16017_p05f 2012 5' Shoot grown with dessication 384bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 115 8.36894e-24
whvd_16017_p05r 2012 3' Shoot grown with dessication 323bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 125 8.15982e-27
whxb_40054_k15r 2012 3' Root 463bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 190 2.07727e-46
whxc_1054_k15f 2012 5' Root, treated at 50 microM Al for 6h 503bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 179 3.56416e-43
whxc_1054_k15r 2012 3' Root, treated at 50 microM Al for 6h 451bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 190 2.04935e-46
whxe_4040_i11r 2012 3' Seedling, infected with leaf rust 650bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 322 6.84043e-86
whxh_18016_a03f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 373bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 105 5.13822e-21
whxh_19016_a03f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 293bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 87 1.88797e-15
whxh_19016_a03r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 416bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 121 1.15402e-25
HX150344 whxs_15060_f15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 791bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 374 1.76642e-101
HX158022 whxs_22085_l22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 797bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 435 1.11891e-119
HX174916 whxt_11055_j14r 2012 3' Roots, 18 day old plants were grown hydroponically 726bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 398 7.31247e-109
HX187394 whxu_18093_d22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 754bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 366 3.37548e-99
whxw_3094_c23r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 326bp Contig13057       hypotheticalproteinOsJ_11031[OryzasativaJaponicaGroup] 67 2.01164e-09
whxy_5075_f18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 725bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 396 2.77874e-108
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