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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 41
First Previous 1-41 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_15090_g24f 2012 5' Dormant seed with water absorption 518bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 7.55608e-92
whem_15090_g24r 2012 3' Dormant seed with water absorption 562bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 5.05751e-72
whf_24065_a11f 2012 5' Spike at flowering date 611bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.70093e-107
whf_24066_a11r 2012 3' Spike at flowering date 528bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.51982e-53
whf_9043_d09f 2012 5' Spike at flowering date 584bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.54393e-96
whf_9043_whr_d09r 2012 3' 537bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 9.29003e-54
whrd_16047_b10f 2012 5' Root of dessiccated seed 656bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.83177e-110
whrd_16047_b10r 2012 3' Root of dessiccated seed 596bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 5.94871e-72
whsc_14052_n15f 2012 5' Shoot grown with cold treatment 486bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 9.68612e-28
whsc_14052_n15r 2012 3' Shoot grown with cold treatment 463bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 154 1.22992e-35
whvs_7003_m01f 2012 5' Liquid cultured tissue 742bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 468 7.87604e-130
whvs_7003_m01r 2012 3' Liquid cultured tissue 723bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.62089e-92
whxb_1021_l06f 2012 5' Root 577bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 2.24763e-102
whxb_1021_l06r 2012 3' Root 376bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 124 1.06468e-26
whxc_20010_g03f 2012 5' Root, treated at 50 microM Al for 6h 559bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 3.64852e-99
whxc_20010_g03r 2012 3' Root, treated at 50 microM Al for 6h 608bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 6.19361e-72
whxc_23051_m14f 2012 5' Root, treated at 50 microM Al for 6h 240bp Contig13025            
whxc_23051_m14r 2012 3' Root, treated at 50 microM Al for 6h 99bp Contig13025            
whxc_9018_o07f 2012 5' Root, treated at 50 microM Al for 6h 664bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.28198e-82
whxc_11018_o07r 2012 3' Root, treated at 50 microM Al for 6h 227bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 2.81022e-35
whxc_9018_o07r 2012 3' Root, treated at 50 microM Al for 6h 607bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 6.19361e-72
whxd_38016_a04f 2012 5' Root, treated at 50 microM Al for 6h 537bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 5.64915e-43
whxd_40016_a04f 2012 5' Root, treated at 50 microM Al for 6h 525bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 3.14162e-40
whxd_38016_a04r 2012 3' Root, treated at 50 microM Al for 6h 526bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 4.5155e-55
whxd_40016_a04r 2012 3' Root, treated at 50 microM Al for 6h 349bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 3.67853e-27
whxe_17091_f22f 2012 5' Seedling, infected with leaf rust 530bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 3.27141e-93
whxe_17091_f22r 2012 3' Seedling, infected with leaf rust 415bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 1.07264e-47
whxg_30074_h19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 405bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 6.37848e-56
whxg_13033_p10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 287bp Contig13025            
whxg_13033_p10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 243bp Contig13025            
whxg_14033_p10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 266bp Contig13025            
whxh_12024_i07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 568bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 4.46949e-100
whxh_12024_i07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 565bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 3.97033e-48
HX020491 whxk_3015_b02f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 324bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.32908e-52
HX020505 whxk_3015_b02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 335bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.47167e-12
HX076219 whxo_2043_f10f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 645bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 416 3.39476e-114
HX076235 whxo_2043_f10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 594bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 5.94871e-72
HX170777 whxt_16025_g06f 2012 5' Roots, 18 day old plants were grown hydroponically 790bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 460 3.17128e-127
HX170805 whxt_16025_g06r 2012 3' Roots, 18 day old plants were grown hydroponically 724bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 9.24674e-72
HX173561 whxt_21040_i12f 2012 5' Roots, 18 day old plants were grown hydroponically 712bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 422 5.9385e-116
HX173590 whxt_21040_i12r 2012 3' Roots, 18 day old plants were grown hydroponically 765bp Contig13025       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.09954e-97
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