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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 45
First Previous 1-45 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_1005_k01r 2012 3' Dormant seed with water absorption 597bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 6.75807e-76
whf_9037_f09f 2012 5' Spike at flowering date 595bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 1.15291e-91
whf_9037_whr_f09r 2012 3' 506bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.75315e-45
whoh_9057_c16f 2012 5' Pistil at heading date 43bp Contig12836       PREDICTED:alpha-solubleNSFattachmentprotein-like[Glycinemax] 36 2.79158
whpc_10086_l24f 2012 5' Anther at meiosis 633bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 1.40123e-109
whpc_10086_l24r 2012 3' Anther at meiosis 782bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 8.85432e-98
whpc_6084_n24f 2012 5' Anther at meiosis 753bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 418 1.26555e-114
whpc_6084_n24r 2012 3' Anther at meiosis 745bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 8.09531e-98
whsc_16001_o01f 2012 5' Shoot grown with cold treatment 631bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.65522e-110
whsc_16001_o01r 2012 3' Shoot grown with cold treatment 601bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 6.86204e-76
whsp_15003_n02r 2012 3' 154bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 6.55972
whv3_16067_m17f 2012 5' Shoot grown under cold condition for 3days 758bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 469 4.87154e-130
whv3_16067_m17r 2012 3' Shoot grown under cold condition for 3days 730bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 3.21731e-96
whvd_3053_k14f 2012 5' Shoot grown with dessication 684bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 427 1.68805e-117
whvd_3053_k14r 2012 3' Shoot grown with dessication 745bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.38406e-89
whxb_39054_k16r 2012 3' Root 139bp Contig12836       PREDICTED:alpha-solubleNSFattachmentprotein-like[Brachypodiumdistachyon] 91 7.52012e-17
whxb_40054_k16r 2012 3' Root 122bp Contig12836       PREDICTED:alpha-solubleNSFattachmentprotein-like[Brachypodiumdistachyon] 82 4.63274e-14
whxb_10021_l06f 2012 5' Root 405bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 4.92935e-24
whxb_10021_l06r 2012 3' Root 350bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 2.5377e-28
whxb_10069_l17f 2012 5' Root 396bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 1.22908e-22
whxb_10069_l17r 2012 3' Root 383bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 4.89497e-32
whxc_1054_k16f 2012 5' Root, treated at 50 microM Al for 6h 264bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 168 8.40922e-40
whxc_26067_m18f 2012 5' Root, treated at 50 microM Al for 6h 314bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 2.54412e-49
whxd_30093_d22f 2012 5' Root, treated at 50 microM Al for 6h 409bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.7259e-61
whxd_30093_d22r 2012 3' Root, treated at 50 microM Al for 6h 534bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 8.03372e-63
whxf_21006_k03f 2012 5' Seedling, infected with leaf rust 50bp Contig12836       PREDICTED:alpha-solubleNSFattachmentprotein-like[Brachypodiumdistachyon] 34 9.28258
whxg_5037_l10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 747bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 422 8.68663e-116
whxh_15063_b14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 440bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 5.46282e-68
whxh_16063_b14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 441bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 5.46282e-68
whxh_15063_b14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 498bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.71728e-45
whxh_16063_b14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 604bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 9.76546e-62
HX017086 whxj_16038_l11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 420bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 8.12543e-67
HX017099 whxj_16038_l11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 287bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00166976
HX071005 whxn_11033_p09f 2012 5' Leaves, plant was grown at constant 23 439bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 1.1925e-22
HX071035 whxn_11033_p09r 2012 3' Leaves, plant was grown at constant 23 427bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 3.76193e-32
HX096733 whxp_31055_i14r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 205bp Contig12836            
HX111506 whxq_2012_e04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 548bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 5.22401e-92
HX111515 whxq_3012_e04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 542bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 5.49569e-94
HX111537 whxq_3012_e04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 576bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 6.19228e-60
HX114631 whxq_25090_g24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 286bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 37 2.18394
HX114651 whxq_25090_g24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 292bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 2.91272e-16
HX168130 whxt_2012_e03f 2012 5' Roots, 18 day old plants were grown hydroponically 563bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 8.11198e-54
HX168156 whxt_2012_e03r 2012 3' Roots, 18 day old plants were grown hydroponically 536bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 5.50586e-59
whxx_9067_m18f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 773bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 464 1.23561e-128
whxx_9067_m18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 780bp Contig12836       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.5551e-97
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