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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 81
First Previous 1-81 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsc_15021_l05f 2012 5' Shoot grown with cold treatment 43bp Contig12764            
whsl_2048_o09f 2012 5' Seed DPA30 357bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 168 4.89176e-40
whsl_2047_o09r 2012 3' Seed DPA30 379bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 216 2.05865e-54
whv_1614095_b21r 2012 3' Shoot grown under cold condition for 16days 78bp Contig12764       Ycf68[Medicagotruncatula] 59 4.21025e-07
whv3_1090_h24r 2012 3' Shoot grown under cold condition for 3days 177bp Contig12764       HypotheticalproteinCOLAER_01802[CollinsellaaerofaciensATCC25986] 64 9.84422e-09
whv3_18024_i07f 2012 5' Shoot grown under cold condition for 3days 327bp Contig12764       predictedprotein[Populustrichocarpa] 144 9.91444e-33
whva_15023_i05f 2012 5' Shoot with ABA treatment 320bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 148 5.29649e-34
whxa_22075_e18f 2012 5' Root 427bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 215 4.56677e-54
whxa_22075_e18r 2012 3' Root 374bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 228 5.25592e-58
whxd_27094_d24f 2012 5' Root, treated at 50 microM Al for 6h 373bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 175 5.28036e-42
whxd_27094_d24r 2012 3' Root, treated at 50 microM Al for 6h 337bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 203 2.32248e-50
whxd_34065_o17f 2012 5' Root, treated at 50 microM Al for 6h 129bp Contig12764       hypotheticalprotein,partial[Arachisdiogoi] 72 6.22325e-11
whxe_36079_a18f 2012 5' Seedling, infected with leaf rust 45bp Contig12764            
whxe_38061_d14f 2012 5' Seedling, infected with leaf rust 356bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.12774e-36
whxe_4089_g21f 2012 5' Seedling, infected with leaf rust 387bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 187 1.32155e-45
whxe_4089_g21r 2012 3' Seedling, infected with leaf rust 350bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 211 6.63186e-53
whxe_9085_k22f 2012 5' Seedling, infected with leaf rust 452bp Contig12764       predictedprotein[Populustrichocarpa] 174 1.16369e-41
whxe_19070_l19f 2012 5' Seedling, infected with leaf rust 429bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.91021e-41
whxe_36052_n15f 2012 5' Seedling, infected with leaf rust 503bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.8842e-41
whxe_29049_p13f 2012 5' Seedling, infected with leaf rust 414bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.88782e-41
whxe_37050_p16f 2012 5' Seedling, infected with leaf rust 354bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.13211e-36
whxf_7063_a13f 2012 5' Seedling, infected with leaf rust 368bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.29431e-39
whxf_24078_c19f 2012 5' Seedling, infected with leaf rust 47bp Contig12764            
whxf_16014_d03f 2012 5' Seedling, infected with leaf rust 448bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 226 2.60289e-57
whxf_16014_d03r 2012 3' Seedling, infected with leaf rust 394bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 241 5.85725e-62
whxf_26027_e05f 2012 5' Seedling, infected with leaf rust 222bp Contig12764       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.57781e-08
whxf_26027_e05r 2012 3' Seedling, infected with leaf rust 195bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 92 5.87537e-17
whxg_1077_c17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 428bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.07033e-42
whxg_32058_h16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 403bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.07326e-42
whxg_30039_i10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 421bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.92574e-41
whxg_27071_j17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 396bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 183 2.53471e-44
whxg_27071_j17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 370bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 226 2.54178e-57
whxg_11069_l18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 360bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 139 4.7741e-36
whxh_13057_g14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 55bp Contig12764            
whxh_7054_k15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 400bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.09847e-42
HX000054 whxi_4016_a03f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 389bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.88583e-41
HX003400 whxi_15059_f13f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 359bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.12336e-36
HX003603 whxi_5076_f20f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 372bp Contig12764       predictedprotein[Populustrichocarpa] 163 2.71191e-38
HX017750 whxj_10036_m11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 278bp Contig12764       predictedprotein[Populustrichocarpa] 139 4.10998e-31
HX020667 whxk_19032_b08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 477bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.03566e-42
HX026361 whxk_4088_j23f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 127bp Contig12764       HypotheticalproteinCOLAER_01802[CollinsellaaerofaciensATCC25986] 59 3.19617e-07
HX046850 whxm_9070_k20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 377bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 3.25224e-41
HX050717 whxn_6048_a12f 2012 5' Leaves, plant was grown at constant 23Ž 424bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.92574e-41
HX087374 whxp_39095_b22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 73bp Contig12764       hypotheticalprotein,partial[Arachisdiogoi] 59 3.09473e-07
HX089335 whxp_37030_d08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 301bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 110 2.05999e-22
HX089362 whxp_37030_d08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 247bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 136 3.48308e-30
HX089742 whxp_8062_d15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 409bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.06066e-42
HX093468 whxp_29026_g07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 396bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 3.28272e-41
HX095937 whxp_20007_i01r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 139bp Contig12764       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.30804e-08
HX101480 whxp_14004_m03f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 627bp Contig12764       predictedprotein[Populustrichocarpa] 176 5.56514e-42
HX102057 whxp_36051_m13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 410bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.89538e-41
HX103336 whxp_36036_n11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 440bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.01848e-42
HX105426 whxp_12082_o23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 452bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.06235e-42
HX106123 whxp_31034_p11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 55bp Contig12764       hypotheticalproteinVITISV_012000[Vitisvinifera] 39 0.248558
HX106237 whxp_34049_p13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 416bp Contig12764       predictedprotein[Populustrichocarpa] 166 2.39515e-39
HX109579 whxq_17045_c10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 427bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.91797e-41
HX109699 whxq_32061_c13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 41bp Contig12764            
HX118249 whxq_2022_k07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 365bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 142 3.71051e-32
HX118271 whxq_2022_k07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 335bp Contig12764       predictedprotein[Populustrichocarpa] 155 5.55358e-36
HX118962 whxq_6085_k22f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 272bp Contig12764       predictedprotein[Populustrichocarpa] 139 4.13924e-31
HX123186 whxq_20065_o17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 464bp Contig12764       predictedprotein[Populustrichocarpa] 176 3.10407e-42
HX176026 whxt_18038_k12f 2012 5' Roots, 18 day old plants were grown hydroponically 804bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 557 1.99842e-156
HX176052 whxt_18038_k12r 2012 3' Roots, 18 day old plants were grown hydroponically 661bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 435 5.74949e-120
HX190712 whxu_13073_g17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 146bp Contig12764       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.73301e-08
HX192834 whxu_6040_i12r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 144bp Contig12764       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.66883e-08
HX195704 whxu_20085_k22f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 814bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 567 1.15827e-159
HX195729 whxu_20085_k22r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 712bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 469 3.24348e-130
whxv_4060_f15f 2012 5' Leaves, plant was grown at constant 23Ž 443bp Contig12764       HypotheticalproteinCOLAER_01671[CollinsellaaerofaciensATCC25986] 157 1.93092e-41
whxv_2085_k22f 2012 5' Leaves, plant was grown at constant 23Ž 478bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 342 3.1985e-92
whxw_6019_m05f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 814bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 566 4.36832e-159
whxx_1079_b18f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 762bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 534 1.61658e-149
whxx_1079_b18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 710bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 469 3.25924e-130
whxx_5044_f12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 367bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 262 3.20048e-68
whxx_9009_g02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 773bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 534 9.72241e-150
whxx_9009_g02r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 710bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 469 3.25924e-130
whxx_8073_h18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 259bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 144 1.00262e-32
whxx_6070_k19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 750bp Contig12764       xylanaseinhibitorproteinI[Triticumaestivum] 180 4.44137e-43
whxx_6070_k19r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 712bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 467 2.10236e-129
whxx_2036_m12f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 697bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 473 2.82994e-131
whxx_2036_m12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 712bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 469 3.24348e-130
whxx_8050_o15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 692bp Contig12764       RecName:Full=Xylanaseinhibitorprotein1;Short=XIP-1;Short=XIP-I;AltName:Full=ClassIIIchitinasehomolog;Flags:Precursor 481 7.79092e-134
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