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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 36
First Previous 1-36 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_26004_e19f 2012 5' Spike at heading date 511bp Contig12252       Shaggy-likekinase[Triticumaestivum] 349 2.03281e-94
whh_26003_e19r 2012 3' Spike at heading date 243bp Contig12252       Shaggy-likekinase[Triticumaestivum] 41 0.152493
whh_9091_g12f 2012 5' Spike at heading date 167bp Contig12252       Shaggy-likekinase[Triticumaestivum] 114 1.42854e-23
whh_9092_g12r 2012 3' Spike at heading date 113bp Contig12252            
whh_1015_o13r 2012 3' Spike at heading date 427bp Contig12252       Shaggy-likekinase[Triticumaestivum] 123 3.0846e-26
whkv_5018_p07f 2012 5' Shoot grown with continuous light after cold treatment 724bp Contig12252       Shaggy-likekinase[Triticumaestivum] 325 7.86726e-87
whkv_5018_p07r 2012 3' Shoot grown with continuous light after cold treatment 673bp Contig12252       Shaggy-likekinase[Triticumaestivum] 208 1.19177e-51
whms_7039_i10f 2012 5' Seed DPA5 of DT3DL CS wheat 543bp Contig12252       Shaggy-likekinase[Triticumaestivum] 208 6.79638e-52
whms_7039_i10r 2012 3' Seed DPA5 of DT3DL CS wheat 606bp Contig12252       Shaggy-likekinase[Triticumaestivum] 242 4.38352e-62
whoh_20012_g19f 2012 5' Pistil at heading date 502bp Contig12252       Shaggy-likekinase[Triticumaestivum] 56 2.66787e-06
whoh_20012_g19r 2012 3' Pistil at heading date 512bp Contig12252       Shaggy-likekinase[Triticumaestivum] 69 3.09437e-10
whvs_9032_a07f 2012 5' Liquid cultured tissue 711bp Contig12252       PREDICTED:shaggy-relatedproteinkinasealpha-like[Brachypodiumdistachyon] 484 9.79056e-135
whxc_4044_f12f 2012 5' Root, treated at 50 microM Al for 6h 248bp Contig12252       PREDICTED:shaggy-relatedproteinkinasealpha-like[Brachypodiumdistachyon] 175 3.95308e-42
whxc_4044_f12r 2012 3' Root, treated at 50 microM Al for 6h 483bp Contig12252       Shaggy-likekinase[Triticumaestivum] 133 1.71996e-29
whxd_8063_b14f 2012 5' Root, treated at 50 microM Al for 6h 447bp Contig12252       PREDICTED:shaggy-relatedproteinkinasealpha-like[Brachypodiumdistachyon] 313 1.23966e-83
whxd_8063_b14r 2012 3' Root, treated at 50 microM Al for 6h 624bp Contig12252       Shaggy-likekinase[Triticumaestivum] 274 1.93457e-71
whxe_37017_p05f 2012 5' Seedling, infected with leaf rust 94bp Contig12252       hypotheticalproteinrf1-C1-g7[Zeamays] 67 1.51898e-09
whxf_11040_j11f 2012 5' Seedling, infected with leaf rust 675bp Contig12252       Shaggy-likekinase[Triticumaestivum] 162 9.90591e-38
whxf_11040_j11r 2012 3' Seedling, infected with leaf rust 530bp Contig12252       Shaggy-likekinase[Triticumaestivum] 69 3.46481e-10
whxf_32050_o15f 2012 5' Seedling, infected with leaf rust 96bp Contig12252            
whxg_12067_m18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 645bp Contig12252       Shaggy-likekinase[Triticumaestivum] 442 4.42342e-122
whxg_13067_m18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 644bp Contig12252       Shaggy-likekinase[Triticumaestivum] 442 4.42342e-122
whxg_12067_m18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 640bp Contig12252       Shaggy-likekinase[Triticumaestivum] 276 4.14507e-72
whxg_13067_m18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 583bp Contig12252       Shaggy-likekinase[Triticumaestivum] 243 2.35093e-62
HX156868 whxs_16086_k24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 771bp Contig12252       Shaggy-likekinase[Triticumaestivum] 427 1.65978e-117
HX156895 whxs_16086_k24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 750bp Contig12252       Shaggy-likekinase[Triticumaestivum] 238 1.36209e-60
HX161642 whxs_18081_o21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 785bp Contig12252       Shaggy-likekinase[Triticumaestivum] 470 3.0398e-130
HX161667 whxs_18081_o21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 756bp Contig12252       Shaggy-likekinase[Triticumaestivum] 348 9.51256e-94
HX190186 whxu_1025_g06r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 761bp Contig12252       Shaggy-likekinase[Triticumaestivum] 348 9.67944e-94
whxw_8021_k06f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 133bp Contig12252            
whxw_8021_k06r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 553bp Contig12252       Shaggy-likekinase[Triticumaestivum] 111 1.19426e-22
whyd_15038_j09f 2012 5' Spikelet at late flowering 595bp Contig12252       Shaggy-likekinase[Triticumaestivum] 308 8.1541e-82
whyd_15038_j09r 2012 3' Spikelet at late flowering 527bp Contig12252       Shaggy-likekinase[Triticumaestivum] 108 8.59523e-22
whyd_10093_k12r 2012 3' Spikelet at late flowering 152bp Contig12252            
whyd_10072_n11r 2012 3' Spikelet at late flowering 201bp Contig12252       conservedhypotheticalprotein[StreptomycesclavuligerusATCC27064] 37 2.2284
whyd_12040_n15r 2012 3' Spikelet at late flowering 480bp Contig12252       Shaggy-likekinase[Triticumaestivum] 46 0.00277766
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