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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 30
First Previous 1-30 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ687415 whrd10b24 2003 5' Root of dessiccated seed 728bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 853 9.66224e-90
CJ687461 whrd10e19 2003 5' Root of dessiccated seed 668bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1090 2.65364e-117
CJ690284 whrd1p05 2003 5' Root of dessiccated seed 736bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1190 8.30379e-129
CJ690641 whrd2e02 2003 5' Root of dessiccated seed 637bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 1007 1.00064e-107
CJ690921 whrd3h08 2003 5' Root of dessiccated seed 676bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1113 5.83686e-120
CJ691098 whrd4e01 2003 5' Root of dessiccated seed 280bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       unknown [Zea mays] 439 3.48733e-42
CJ691241 whrd4m07 2003 5' Root of dessiccated seed 691bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1028 4.03368e-114
CJ692179 whrd8f02 2003 5' Root of dessiccated seed 742bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1183 5.47679e-128
CJ692185 whrd8f11 2003 5' Root of dessiccated seed 674bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1028 4.19269e-110
CJ687934 whrd12b20 2003 5' Root of dessiccated seed 724bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1191 6.1349e-129
CJ688330 whrd13j13 2003 5' Root of dessiccated seed 669bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1065 2.12546e-114
CJ688331 whrd13j14 2003 5' Root of dessiccated seed 429bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os01g0840100 [Oryza sativa (japonica cultivar-group)] 529 1.29979e-52
CJ688503 whrd14d13 2003 5' Root of dessiccated seed 689bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1106 3.98459e-119
CJ688568 whrd14i04 2003 5' Root of dessiccated seed 726bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1078 7.84941e-116
CJ689288 whrd17f23 2003 5' Root of dessiccated seed 661bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 978 2.56005e-104
CJ690355 whrd20d16 2003 5' Root of dessiccated seed 709bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 1125 2.64705e-121
CJ690467 whrd20k03 2003 5' Root of dessiccated seed 349bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       Os03g0276500 [Oryza sativa (japonica cultivar-group)] 523 6.48103e-52
CJ580933 rwhrd10b24 2003 3' Root of dessiccated seed 710bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 886 1.36262e-93
CJ580980 rwhrd10e19 2003 3' Root of dessiccated seed 741bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 931 9.03308e-99
CJ584537 rwhrd3h08 2003 3' Root of dessiccated seed 761bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 918 3.08272e-97
CJ584750 rwhrd4e01 2003 3' Root of dessiccated seed 525bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 631 2.42271e-64
CJ584817 rwhrd4i02 2003 3' Root of dessiccated seed 698bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 959 4.56008e-102
CJ584895 rwhrd4m07 2003 3' Root of dessiccated seed 746bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 953 2.58391e-101
CJ585856 rwhrd8f02 2003 3' Root of dessiccated seed 761bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 965 1.09389e-102
CJ581475 rwhrd12b20 2003 3' Root of dessiccated seed 740bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 935 3.10463e-99
CJ581881 rwhrd13j13 2003 3' Root of dessiccated seed 737bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 927 2.60537e-98
CJ581882 rwhrd13j14 2003 3' Root of dessiccated seed 432bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 347 1.64499e-31
CJ582058 rwhrd14d13 2003 3' Root of dessiccated seed 741bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 930 1.19002e-98
CJ582845 rwhrd17f23 2003 3' Root of dessiccated seed 733bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 923 7.44747e-98
CJ583934 rwhrd20d16 2003 3' Root of dessiccated seed 760bp Wh_RDr_all.Contig2680 MUGEST2003_all.Contig25156 MUGEST2003_all.Contig25156       hypothetical protein OsI_010683 [Oryza sativa (indica cultivar-group)] 960 4.15677e-102
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