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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 48
First Previous 1-48 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ627077 whcs10b20 2003 5' Callus 197bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 215 3.35e-16
CJ631899 whcs9j10 2003 5' Callus 796bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       unknown [Zea mays] 711 3.36836e-73
CJ631905 whcs9j21 2003 5' Callus 515bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 690 3.27659e-71
CJ518232 rwhcs10b20 2003 3' Callus 681bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 608 2.17731e-61
CJ523349 rwhcs9j10 2003 3' Callus 871bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.72065e-68
CJ523356 rwhcs9j21 2003 3' Callus 690bp Wh_CSEC_all.Contig1887 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 549 1.55808e-54
CJ636908 whdp7j20 2003 5' Seed DPA20 683bp Wh_DPA20_all.Contig1993 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 597 4.10622e-60
CJ637207 whdp8l05 2003 5' Seed DPA20 496bp Wh_DPA20_all.Contig1993 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       hypothetical protein OsI_023113 [Oryza sativa (indica cultivar-group)] 277 2.22216e-23
CJ528485 rwhdp7j20 2003 3' Seed DPA20 713bp Wh_DPA20_all.Contig1993 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 508 9.33463e-50
CJ528784 rwhdp8l05 2003 3' Seed DPA20 461bp Wh_DPA20_all.Contig1993 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       hypothetical protein OsI_023113 [Oryza sativa (indica cultivar-group)] 255 7.57478e-21
CJ650263 whem1b13 2003 5' Dormant seed with water absorption 193bp whem1b13 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 196 5.38304e-14
CJ542093 rwhem1b13 2003 3' Dormant seed with water absorption 743bp Wh_EM_all.Contig1609 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 588 5.40404e-59
CJ657194 whgc9m19 2003 5' Anther at meiosis of DT4B CS wheat 610bp whgc9m19 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 442 3.01315e-42
CJ660097 whhg2l17 2003 5' Anther at meiosis of MT4B CS wheat 647bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 621 3.70312e-63
CJ661194 whhg7n22 2003 5' Anther at meiosis of MT4B CS wheat 768bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 743 6.06541e-77
CJ657886 whhg12p11 2003 5' Anther at meiosis of MT4B CS wheat 670bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 737 2.29734e-76
CJ658050 whhg13k10 2003 5' Anther at meiosis of MT4B CS wheat 652bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 737 2.18392e-76
CJ552523 rwhhg2l17 2003 3' Anther at meiosis of MT4B CS wheat 810bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 573 3.51124e-57
CJ553664 rwhhg7n22 2003 3' Anther at meiosis of MT4B CS wheat 852bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 630 9.33483e-64
CJ550230 rwhhg12p11 2003 3' Anther at meiosis of MT4B CS wheat 864bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 651 3.51922e-66
CJ550405 rwhhg13k10 2003 3' Anther at meiosis of MT4B CS wheat 867bp Wh_HGCPCDAM_all.Contig2200 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.70969e-68
CJ671125 whkv4m17 2003 5' Shoot grown with continuous light after cold treatment 819bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       unknown [Zea mays] 717 7.14422e-74
CJ668123 whkv13m02 2003 5' Shoot grown with continuous light after cold treatment 771bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 743 6.11472e-77
CJ669079 whkv17f22 2003 5' Shoot grown with continuous light after cold treatment 777bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       unknown [Zea mays] 708 7.1654e-73
CJ669164 whkv17k12 2003 5' Shoot grown with continuous light after cold treatment 652bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 691 4.65884e-71
CJ669216 whkv17n07 2003 5' Shoot grown with continuous light after cold treatment 808bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 697 1.45774e-71
CJ564023 rwhkv4m17 2003 3' Shoot grown with continuous light after cold treatment 832bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 656 8.65975e-67
CJ560892 rwhkv13m02 2003 3' Shoot grown with continuous light after cold treatment 861bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.68777e-68
CJ561885 rwhkv17f22 2003 3' Shoot grown with continuous light after cold treatment 878bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.74257e-68
CJ561975 rwhkv17k12 2003 3' Shoot grown with continuous light after cold treatment 855bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 662 1.84182e-67
CJ562030 rwhkv17n07 2003 3' Shoot grown with continuous light after cold treatment 841bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 622 7.74436e-63
CJ562031 rwhkv17n08 2003 3' Shoot grown with continuous light after cold treatment 329bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 405 3.09724e-38
CJ562148 rwhkv18e09 2003 3' Shoot grown with continuous light after cold treatment 144bp Wh_KMV_all.Contig2495 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 104 0.00243222
CJ677590 whms9g11 2003 5' Seed DPA5 of DT3DL CS wheat 727bp Wh_MS_all.Contig2199 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       unknown [Zea mays] 716 7.43251e-74
CJ673039 whms12b21 2003 5' Seed DPA5 of DT3DL CS wheat 744bp Wh_MS_all.Contig2199 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 597 4.92989e-60
CJ570711 rwhms9g11 2003 3' Seed DPA5 of DT3DL CS wheat 755bp Wh_MS_all.Contig2199 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 585 1.24541e-58
CJ566025 rwhms12b21 2003 3' Seed DPA5 of DT3DL CS wheat 756bp Wh_MS_all.Contig2199 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 586 9.61523e-59
CJ677804 whok10d07 2003 5' Seed DPA5 772bp Wh_OKCS_all.Contig2053 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       unknown [Zea mays] 726 5.76936e-75
CJ682207 whok7h03 2003 5' Seed DPA5 707bp Wh_OKCS_all.Contig2053 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 702 2.96766e-72
CJ570928 rwhok10d07 2003 3' Seed DPA5 868bp Wh_OKCS_all.Contig2053 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.70969e-68
CJ575499 rwhok7h03 2003 3' Seed DPA5 871bp Wh_OKCS_all.Contig2053 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.72065e-68
CJ691881 whrd7b16 2003 5' Root of dessiccated seed 524bp Wh_RDr_all.Contig2482 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 698 4.12294e-72
CJ696909 whsc6j08 2003 5' Shoot grown with cold treatment 495bp Wh_SHC_all.Contig730 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       hypothetical protein OsI_023113 [Oryza sativa (indica cultivar-group)] 258 3.54774e-21
CJ590820 rwhsc6j08 2003 3' Shoot grown with cold treatment 464bp Wh_SHC_all.Contig730 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       hypothetical protein OsI_023113 [Oryza sativa (indica cultivar-group)] 251 2.19432e-20
CJ728628 whvs2a14 2003 5' Liquid cultured tissue 776bp Wh_VSCB_all.Contig2337 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       F1-ATPase [Triticum aestivum] 743 6.21334e-77
CJ729451 whvs5d04 2003 5' Liquid cultured tissue 429bp Wh_VSCB_all.Contig2337 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 499 3.91357e-49
CJ624890 rwhvs2a14 2003 3' Liquid cultured tissue 882bp Wh_VSCB_all.Contig2337 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 671 1.75353e-68
CJ625737 rwhvs5d04 2003 3' Liquid cultured tissue 873bp Wh_VSCB_all.Contig2337 MUGEST2003_all.Contig24947 MUGEST2003_all.Contig24947       Os06g0646500 [Oryza sativa (japonica cultivar-group)] 662 1.91452e-67
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