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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 45
First Previous 1-45 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ627639 whcs12f11 2003 5' Callus 776bp Wh_CSEC_all.Contig1772 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1106 5.02423e-119
CJ628666 whcs16g08 2003 5' Callus 569bp Wh_CSEC_all.Contig232 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 1.01829e-35
CJ519916 rwhcs16g08 2003 3' Callus 541bp Wh_CSEC_all.Contig232 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 8.74455e-36
CJ634923 whdp1g03 2003 5' Seed DPA20 645bp Wh_DPA20_all.Contig1391 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 1.38326e-35
CJ632643 whdp12d15 2003 5' Seed DPA20 475bp Wh_DPA20_all.Contig1749 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 445 7.1049e-43
CJ634656 whdp19g14 2003 5' Seed DPA20 602bp Wh_DPA20_all.Contig43 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       putative UDP-glucose dehydrogenase [Sorghum bicolor] 841 1.5653e-88
CJ526430 rwhdp1g03 2003 3' Seed DPA20 657bp Wh_DPA20_all.Contig1391 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 1.46463e-35
CJ524106 rwhdp12d15 2003 3' Seed DPA20 443bp Wh_DPA20_all.Contig1749 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 479 7.98996e-47
CJ658917 whhg17e20 2003 5' Anther at meiosis of MT4B CS wheat 699bp Wh_HGCPCDAM_all.Contig1896 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 990 1.15962e-105
CJ551283 rwhhg17e20 2003 3' Anther at meiosis of MT4B CS wheat 793bp Wh_HGCPCDAM_all.Contig1896 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 759 9.08286e-79
CJ667284 whkv10h19 2003 5' Shoot grown with continuous light after cold treatment 685bp Wh_KMV_all.Contig2438 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036961 [Oryza sativa (indica cultivar-group)] 1111 1.03798e-119
CJ670838 whkv3n15 2003 5' Shoot grown with continuous light after cold treatment 777bp Wh_KMV_all.Contig2438 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1098 4.28703e-118
CJ668297 whkv14g05 2003 5' Shoot grown with continuous light after cold treatment 788bp Wh_KMV_all.Contig2438 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1106 5.18373e-119
CJ669375 whkv18h05 2003 5' Shoot grown with continuous light after cold treatment 778bp Wh_KMV_all.Contig2438 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1100 2.51329e-118
CJ676638 whms5k11 2003 5' Seed DPA5 of DT3DL CS wheat 508bp Wh_MS_all.Contig549 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 7.32576e-36
CJ569730 rwhms5k11 2003 3' Seed DPA5 of DT3DL CS wheat 435bp Wh_MS_all.Contig549 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 6.42669e-36
CJ567317 rwhms16m18 2003 3' Seed DPA5 of DT3DL CS wheat 769bp Wh_MS_all.Contig1686 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 920 1.82833e-97
CJ680393 whok1e23 2003 5' Seed DPA5 790bp Wh_OKCS_all.Contig1643 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1048 1.06125e-114
CJ572235 rwhok14p15 2003 3' Seed DPA5 830bp Wh_OKCS_all.Contig1906 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 889 8.25248e-94
CJ572622 rwhok16i17 2003 3' Seed DPA5 800bp Wh_OKCS_all.Contig1906 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 822 4.56548e-86
CJ684021 whpc15b17 2003 5' Anther at meiosis 823bp whpc15b17 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1311 9.52379e-143
CJ690237 whrd1m09 2003 5' Root of dessiccated seed 659bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 1065 2.06644e-114
CJ691124 whrd4f18 2003 5' Root of dessiccated seed 749bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036961 [Oryza sativa (indica cultivar-group)] 1206 1.19935e-130
CJ691447 whrd5i08 2003 5' Root of dessiccated seed 691bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 1068 1.01563e-114
CJ692307 whrd8m03 2003 5' Root of dessiccated seed 638bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 935 2.26162e-99
CJ687687 whrd11c02 2003 5' Root of dessiccated seed 671bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 1048 1.98937e-112
CJ688946 whrd16a06 2003 5' Root of dessiccated seed 649bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 1025 8.58506e-110
CJ689165 whrd16o02 2003 5' Root of dessiccated seed 699bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 1112 8.35306e-120
CJ690472 whrd20k09 2003 5' Root of dessiccated seed 695bp Wh_RDr_all.Contig2661 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 1.63605e-35
CJ585108 rwhrd5i08 2003 3' Root of dessiccated seed 747bp Wh_RDr_all.Contig1604 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 810 9.86451e-85
CJ582493 rwhrd16a06 2003 3' Root of dessiccated seed 751bp Wh_RDr_all.Contig1604 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 798 2.47125e-83
CJ695243 whsc1c20 2003 5' Shoot grown with cold treatment 134bp whsc1c20 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       putative UDP-glucose dehydrogenase [Sorghum bicolor] 200 1.81202e-14
CJ695442 whsc20a02 2003 5' Shoot grown with cold treatment 585bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 415 3.65473e-39
CJ695444 whsc20a04 2003 5' Shoot grown with cold treatment 600bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 465 6.14066e-45
CJ697283 whsc8c03 2003 5' Shoot grown with cold treatment 591bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 721 1.21498e-74
CJ587028 rwhsc12l14 2003 3' Shoot grown with cold treatment 215bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 324 7.5378e-29
CJ589301 rwhsc20a02 2003 3' Shoot grown with cold treatment 560bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 490 6.46971e-48
CJ589303 rwhsc20a04 2003 3' Shoot grown with cold treatment 549bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 490 6.16885e-48
CJ591227 rwhsc8c03 2003 3' Shoot grown with cold treatment 660bp Wh_SHC_all.Contig2370 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 519 4.28884e-51
CJ601157 rwhv16n6m23 2003 3' Shoot grown under cold condition for 16days 779bp rwhv16n6m23 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       unknown [Zea mays] 845 9.31499e-89
CJ721207 whvh11c24 2003 5' Shoot with heat shock treatment 740bp Wh_VHS_all.Contig16 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 385 1.85419e-35
CJ617235 rwhvh11c24 2003 3' Shoot with heat shock treatment 600bp Wh_VHS_all.Contig16 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os09g0560300 [Oryza sativa (japonica cultivar-group)] 270 2.54584e-22
CJ728802 whvs2k23 2003 5' Liquid cultured tissue 416bp Wh_VSCB_all.Contig1380 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 251 2.20286e-20
CJ728612 whvs20p13 2003 5' Liquid cultured tissue 667bp Wh_VSCB_all.Contig2030 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       Os12g0443600 [Oryza sativa (japonica cultivar-group)] 1092 1.5388e-117
CJ625066 rwhvs2k23 2003 3' Liquid cultured tissue 403bp Wh_VSCB_all.Contig1380 MUGEST2003_all.Contig24886 MUGEST2003_all.Contig24886       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 301 3.58112e-26
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