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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 28
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ554138 rwhkp10a06 2003 3' Shoot grown under continuous light 811bp rwhkp10a06 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 1.25756e-30
CJ670030 whkv1p05 2003 5' Shoot grown with continuous light after cold treatment 593bp Wh_KMV_all.Contig1514 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 6.40557e-31
CJ562892 rwhkv1p05 2003 3' Shoot grown with continuous light after cold treatment 548bp Wh_KMV_all.Contig1514 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 5.24652e-31
CJ574019 rwhok20o10 2003 3' Seed DPA5 353bp rwhok20o10 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       Uncharacterized 12.8 kDa protein in ycf9-trnS intergenic region (ORF111) 80 0.0662543
CJ705005 whv16n1d07 2003 5' Shoot grown under cold condition for 16days 209bp whv16n1d07 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365            
CJ707829 whv3n12f10 2003 5' Shoot grown under cold condition for 3days 712bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.70474e-31
CJ709079 whv3n17i18 2003 5' Shoot grown under cold condition for 3days 719bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.88784e-31
CJ709348 whv3n18l18 2003 5' Shoot grown under cold condition for 3days 703bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.47403e-31
CJ605065 rwhv3n3b04 2003 3' Shoot grown under cold condition for 3days 497bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       putative Hooker's evening primrose chloroplast hypothetical 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) [Oryza sativa Japonica Group] 177 1.59029e-18
CJ605372 rwhv3n4h22 2003 3' Shoot grown under cold condition for 3days 817bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 1.27578e-30
CJ605577 rwhv3n5g09 2003 3' Shoot grown under cold condition for 3days 629bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       putative Hooker's evening primrose chloroplast hypothetical 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) [Oryza sativa Japonica Group] 337 4.79175e-30
CJ602493 rwhv3n12f10 2003 3' Shoot grown under cold condition for 3days 668bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.46224e-31
CJ603853 rwhv3n17l18 2003 3' Shoot grown under cold condition for 3days 667bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.46224e-31
CJ604045 rwhv3n18i18 2003 3' Shoot grown under cold condition for 3days 686bp Wh_V483_all.Contig1573 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.01412e-31
CJ712616 whva14p16 2003 5' Shoot with ABA treatment 343bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       SJCHGC01805 protein [Schistosoma japonicum] 73 9.55901
CJ713227 whva17j23 2003 5' Shoot with ABA treatment 655bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.13187e-31
CJ713289 whva17p19 2003 5' Shoot with ABA treatment 699bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.47403e-31
CJ608656 rwhva17p19 2003 3' Shoot with ABA treatment 677bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.73818e-31
CJ607921 rwhva14p16 2003 3' Shoot with ABA treatment 665bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.37026e-31
CJ609989 rwhva3e07 2003 3' Shoot with ABA treatment 532bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 4.77808e-31
CJ610658 rwhva6a20 2003 3' Shoot with ABA treatment 675bp Wh_VABA_all.Contig1348 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.6462e-31
CJ725300 whvh9g18 2003 5' Shoot with heat shock treatment 690bp Wh_VHS_all.Contig913 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.10611e-31
CJ621038 rwhvh7l20 2003 3' Shoot with heat shock treatment 706bp Wh_VHS_all.Contig913 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       putative Hooker's evening primrose chloroplast hypothetical 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) [Oryza sativa Japonica Group] 336 8.17598e-30
CJ621409 rwhvh9g18 2003 3' Shoot with heat shock treatment 413bp Wh_VHS_all.Contig913 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       putative Hooker's evening primrose chloroplast hypothetical 8.4 kDa protein in ycf9-trnS intergenic region (ORF75) [Oryza sativa Japonica Group] 136 4.78395e-07
CJ719089 whvd2i13 2003 5' Shoot grown with dessication 686bp Wh_VWD_all.Contig1437 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.01412e-31
CJ720287 whvd7i12 2003 5' Shoot grown with dessication 699bp Wh_VWD_all.Contig1437 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 9.38205e-31
CJ614983 rwhvd2i13 2003 3' Shoot grown with dessication 648bp Wh_VWD_all.Contig1437 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 7.94705e-31
CJ616253 rwhvd7i12 2003 3' Shoot grown with dessication 675bp Wh_VWD_all.Contig1437 MUGEST2003_all.Contig24365 MUGEST2003_all.Contig24365       ORF 62 344 8.6462e-31
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