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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 93
First Previous 1-93 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_6096_a23f 2012 5' Callus 629bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.38284e-56
whcs_6096_a23r 2012 3' Callus 591bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.16714e-56
whdl_15067_e23f 2012 5' Crown of seedling 458bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 215 3.45722e-54
whdl_22021_i14f 2012 5' Crown of seedling 129bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 83 2.69945e-14
whdl_22021_i14r 2012 3' Crown of seedling 290bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 115 8.48561e-24
whdl_13024_n14r 2012 3' Crown of seedling 421bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 189 2.70617e-46
whe_2075_g23f 2012 5' Seed DPA10 530bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 215 3.90947e-54
whe_3075_g23f 2012 5' Seed DPA10 379bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 136 2.69671e-30
whe_3075_g23r 2012 3' Seed DPA10 477bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 221 6.30044e-56
whe_2075_g23r 2012 3' Seed DPA10 502bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.39733e-57
whei_5093_c21r 2012 3' Dormant seed with water absorption after breaking 500bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.43176e-57
whei_6083_n21f 2012 5' Dormant seed with water absorption after breaking 555bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 9.67948e-57
whei_6083_n21r 2012 3' Dormant seed with water absorption after breaking 486bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.6039e-57
whkp_19050_p16f 2012 5' Shoot grown under continuous light 577bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.09304e-56
whkp_19050_p16r 2012 3' Shoot grown under continuous light 531bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.4162e-57
whoh_1090_c06r 2012 3' Pistil at heading date 250bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 107 1.72073e-21
whoh_7023_m20f 2012 5' Pistil at heading date 484bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 215 3.53215e-54
whok_15025_g06r 2012 3' Seed DPA5 45bp Contig11007            
whr_12077_k23r 2012 3' Root 194bp Contig11007            
whrd_1047_b10r 2012 3' Root of dessiccated seed 41bp Contig11007            
whrd_7056_j16r 2012 3' Root of dessiccated seed 107bp Contig11007            
whsc_6058_g15f 2012 5' Shoot grown with cold treatment 588bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.14862e-56
whsc_6058_g15r 2012 3' Shoot grown with cold treatment 544bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 9.1643e-57
whsd_20035_n09f 2012 5' Shoot grown with dessication 559bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.00518e-56
whsd_20035_n09r 2012 3' Shoot grown with dessication 501bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.43176e-57
whsp_20086_k23f 2012 5' 40bp Contig11007            
whvs_17012_f03f 2012 5' Liquid cultured tissue 556bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 9.86562e-57
whvs_17012_f03r 2012 3' Liquid cultured tissue 528bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.4162e-57
whvs_17012_f04r 2012 3' Liquid cultured tissue 487bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.56947e-57
whvs_2010_h04f 2012 5' Liquid cultured tissue 357bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 93 3.4113e-17
whvs_2010_h04r 2012 3' Liquid cultured tissue 351bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 118 9.97919e-25
whxa_22056_i15f 2012 5' Root 447bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 183 1.47505e-44
whxa_22056_i15r 2012 3' Root 432bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 207 9.48209e-52
whxa_21040_j11f 2012 5' Root 572bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.05599e-56
whxa_21040_j11r 2012 3' Root 528bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.22917e-57
whxb_32032_a07f 2012 5' Root 417bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 145 7.46283e-33
whxb_32032_a07r 2012 3' Root 389bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 177 1.36209e-42
whxb_6032_b08f 2012 5' Root 355bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 93 3.4113e-17
whxb_6032_b08r 2012 3' Root 315bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 95 6.75746e-18
whxb_4045_c10f 2012 5' Root 241bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 66 2.60403e-09
whxb_4045_c10r 2012 3' Root 198bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 86 4.19685e-15
whxb_31093_d21f 2012 5' Root 541bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 222 3.48243e-56
whxb_31093_d21r 2012 3' Root 516bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.8922e-57
whxb_1022_l08f 2012 5' Root 613bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.29065e-56
whxb_1022_l08r 2012 3' Root 420bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 166 2.46358e-39
whxb_1054_l15f 2012 5' Root 535bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.79025e-57
whxb_1054_l15r 2012 3' Root 358bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 165 7.06369e-39
whxc_18015_a02f 2012 5' Root, treated at 50 microM Al for 6h 184bp Contig11007            
whxc_18015_a02r 2012 3' Root, treated at 50 microM Al for 6h 163bp Contig11007            
whxc_24059_f13f 2012 5' Root, treated at 50 microM Al for 6h 213bp Contig11007            
whxc_24059_f13r 2012 3' Root, treated at 50 microM Al for 6h 186bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 47 0.00128314
whxc_4060_f15f 2012 5' Root, treated at 50 microM Al for 6h 237bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 42 0.0691571
whxc_4060_f15r 2012 3' Root, treated at 50 microM Al for 6h 200bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 57 1.59328e-06
whxc_15090_g24f 2012 5' Root, treated at 50 microM Al for 6h 496bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 215 3.46818e-54
whxc_15090_g24r 2012 3' Root, treated at 50 microM Al for 6h 468bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.57666e-57
whxc_37023_i06f 2012 5' Root, treated at 50 microM Al for 6h 565bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.04241e-56
whxc_37023_i06r 2012 3' Root, treated at 50 microM Al for 6h 525bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.04214e-57
whxc_28056_i16r 2012 3' Root, treated at 50 microM Al for 6h 314bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 141 6.29552e-32
whxd_35077_d18f 2012 5' Root, treated at 50 microM Al for 6h 524bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.04214e-57
whxd_35077_d18r 2012 3' Root, treated at 50 microM Al for 6h 493bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.50061e-57
whxd_40089_h22f 2012 5' Root, treated at 50 microM Al for 6h 315bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 91 7.47125e-17
whxd_40089_h22r 2012 3' Root, treated at 50 microM Al for 6h 282bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 105 6.5535e-21
whxd_12017_o05f 2012 5' Root, treated at 50 microM Al for 6h 481bp Contig11007       hypotheticalproteinLbuc_0779[LactobacillusbuchneriNRRLB-30929] 42 0.0681078
whxd_12017_o05r 2012 3' Root, treated at 50 microM Al for 6h 450bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 46 0.00477964
whxg_16028_f07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 532bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.60322e-57
whxg_16028_f07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 505bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.39733e-57
HX044402 whxm_13074_g20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 291bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 165 5.47476e-39
HX044403 whxm_14074_g20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 307bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 174 8.86176e-42
HX044417 whxm_13074_g20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 583bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.11157e-56
HX044418 whxm_14074_g20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 580bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.09304e-56
HX076907 whxo_7025_g06f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 468bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 197 1.28965e-48
HX076922 whxo_7025_g06r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 473bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.50957e-57
HX079721 whxo_1072_j19f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 468bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 197 1.28965e-48
HX079740 whxo_1072_j19r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 476bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.47602e-57
HX089722 whxp_21062_d15f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 595bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.2042e-56
HX089755 whxp_21062_d15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 549bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 221 8.03659e-56
HX142943 whxr_28018_p08f 2012 5' Roots, 18 day old plants were grown hydroponically 577bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 214 1.47729e-53
HX142967 whxr_28018_p08r 2012 3' Roots, 18 day old plants were grown hydroponically 574bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.07451e-56
HX146864 whxs_13077_c17f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 493bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 214 1.01374e-53
HX146887 whxs_13077_c17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 481bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.40893e-57
HX157249 whxs_27022_l07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 585bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.13009e-56
HX157274 whxs_27022_l07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 553bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 9.67948e-57
HX161392 whxs_30050_o16f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 573bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.05599e-56
HX161420 whxs_30050_o16r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 534bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.79025e-57
HX186774 whxu_17045_d10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 609bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.27221e-56
HX186799 whxu_17045_d10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 585bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 1.14862e-56
whyd_19052_f10r 2012 3' Spikelet at late flowering 499bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.43176e-57
whyd_15075_g11r 2012 3' Spikelet at late flowering 48bp Contig11007       PREDICTED:60SribosomalproteinL35-4-like[Brachypodiumdistachyon] 36 3.19038
whyd_15076_h11r 2012 3' Spikelet at late flowering 499bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.43176e-57
whyd_9048_o15f 2012 5' Spikelet at late flowering 525bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.22917e-57
whyd_9048_o15r 2012 3' Spikelet at late flowering 534bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 8.79025e-57
whyd_5041_p02f 2012 5' Spikelet at late flowering 553bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 9.67948e-57
whyd_5041_p02r 2012 3' Spikelet at late flowering 511bp Contig11007       PREDICTED:60SribosomalproteinL35-like[Brachypodiumdistachyon] 224 7.51638e-57
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