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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 22
First Previous 1-22 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_19085_l22f 2012 5' Seed DPA20 544bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 249 4.51624e-64
whdp_19085_l22r 2012 3' Seed DPA20 602bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 269 5.62654e-70
whe_6055_m04f 2012 5' Seed DPA10 441bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 227 1.49112e-57
whe_6055_m04r 2012 3' Seed DPA10 511bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.28508e-48
whf_24042_d15f 2012 5' Spike at flowering date 452bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 299 2.39847e-79
whf_24043_d15r 2012 3' Spike at flowering date 479bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.27244e-48
whf_24054_i16r 2012 3' Spike at flowering date 528bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 211 9.62937e-53
whms_4031_a06r 2012 3' Seed DPA5 of DT3DL CS wheat 75bp Contig10895       unknown[Lotusjaponicus] 48 0.000931797
whoh_13091_g06r 2012 3' Pistil at heading date 514bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 217 1.56726e-54
whr_19044_g15r 2012 3' Root 352bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 128 5.63164e-28
whsc_11072_j19f 2012 5' Shoot grown with cold treatment 47bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 36 2.99098
whsl_24054_j16r 2012 3' Seed DPA30 447bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 160 2.29085e-37
whsl_8071_m05r 2012 3' Seed DPA30 463bp Contig10895       RecName:Full=Tubulinbeta-5chain;AltName:Full=Beta-5-tubulin 171 1.20993e-43
whv3_8013_d01r 2012 3' Shoot grown under cold condition for 3days 659bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 309 3.64326e-82
whv3_2006_k04r 2012 3' Shoot grown under cold condition for 3days 604bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 271 8.68051e-71
whxa_6026_g08f 2012 5' Root 365bp Contig10895       PREDICTED:tubulinbeta-5chain-like[Brachypodiumdistachyon] 246 1.8245e-63
whxc_1045_d10f 2012 5' Root, treated at 50 microM Al for 6h 648bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 440 1.30331e-121
whxd_35070_l20f 2012 5' Root, treated at 50 microM Al for 6h 170bp Contig10895            
whxd_35070_l20r 2012 3' Root, treated at 50 microM Al for 6h 131bp Contig10895            
HX043804 whxm_6091_f21r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 434bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 157 1.46345e-36
HX058787 whxn_5041_g10r 2012 3' Leaves, plant was grown at constant 23℃ 701bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 333 3.53618e-89
whyd_5026_c14r 2012 3' Spikelet at late flowering 584bp Contig10895       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 244 1.05528e-62
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