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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 98
First Previous 1-98 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_3005_l02f 2012 5' Callus 645bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 390 2.02007e-106
whcs_3005_l02r 2012 3' Callus 657bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.94531e-59
whe_17030_l20f 2012 5' Seed DPA10 298bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 179 2.77495e-43
whe_17030_l20r 2012 3' Seed DPA10 370bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 87 1.89865e-15
whei_17029_c05r 2012 3' Dormant seed with water absorption after breaking 84bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 47 0.00126028
whei_17076_e19f 2012 5' Dormant seed with water absorption after breaking 389bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 61 8.34054e-08
whei_17076_e19r 2012 3' Dormant seed with water absorption after breaking 360bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 85 5.42511e-15
whem_4009_g02f 2012 5' Dormant seed with water absorption 334bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 73 2.12509e-11
whem_5009_g02f 2012 5' Dormant seed with water absorption 171bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 71 1.05851e-10
whem_4009_g02r 2012 3' Dormant seed with water absorption 282bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 91 9.79291e-17
whem_5009_g02r 2012 3' Dormant seed with water absorption 261bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 92 5.88475e-17
whem_2023_i05f 2012 5' Dormant seed with water absorption 230bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 144 1.301e-32
whem_2023_i05r 2012 3' Dormant seed with water absorption 361bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 108 5.96097e-22
whkp_10032_b08r 2012 3' Shoot grown under continuous light 671bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 302 4.59044e-80
whkp_15062_d15f 2012 5' Shoot grown under continuous light 742bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 288 1.45885e-75
whkp_15062_d15r 2012 3' Shoot grown under continuous light 562bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 199 3.46277e-49
whoh_13019_e08f 2012 5' Pistil at heading date 427bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 279 1.97175e-73
whoh_13019_e08r 2012 3' Pistil at heading date 345bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 96 4.09216e-18
whr_3058_d16f 2012 5' Root 558bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 369 3.23884e-100
whr_3058_d16r 2012 3' Root 126bp Contig1087            
whrd_19014_c03f 2012 5' Root of dessiccated seed 713bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 267 2.44478e-69
whsd_9081_p21f 2012 5' Shoot grown with dessication 525bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 357 7.94942e-97
whsd_9081_p21r 2012 3' Shoot grown with dessication 610bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 228 1.15067e-57
whsl_27052_e22f 2012 5' Seed DPA30 435bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 294 5.87301e-78
whsl_14070_i17f 2012 5' Seed DPA30 579bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 374 8.54099e-102
whsl_14069_i17r 2012 3' Seed DPA30 498bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 159 3.83458e-37
whsp_14015_b02f 2012 5' 549bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 357 1.20154e-96
whsp_14015_b02r 2012 3' 631bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 222 5.25477e-56
whva_3084_f12f 2012 5' Shoot with ABA treatment 564bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 367 1.2772e-99
whxa_9077_d18f 2012 5' Root 382bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 238 6.55465e-61
whxa_9077_d18r 2012 3' Root 620bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.67543e-59
whxa_26071_j18f 2012 5' Root 354bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 56 2.71972e-06
whxa_26071_j18r 2012 3' Root 322bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 61 1.44704e-07
whxb_29015_a02f 2012 5' Root 209bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 136 2.67232e-30
whxb_29015_a02r 2012 3' Root 544bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 177 1.67789e-42
whxb_20047_b10f 2012 5' Root 285bp Contig1087            
whxb_20047_b10r 2012 3' Root 267bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 58 9.35131e-07
whxb_17030_c08f 2012 5' Root 550bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 313 1.55395e-83
whxb_17030_c08r 2012 3' Root 649bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.87583e-59
whxb_11076_e20f 2012 5' Root 436bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 96 3.98683e-18
whxb_11076_e20r 2012 3' Root 434bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 121 6.81375e-26
whxb_1024_j07f 2012 5' Root 578bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 381 5.34974e-104
whxb_7021_k06r 2012 3' Root 349bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 79 3.93331e-13
whxb_4070_l19f 2012 5' Root 597bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 398 7.94722e-109
whxb_4070_l19r 2012 3' Root 320bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 62 4.99198e-08
whxb_13034_p11f 2012 5' Root 236bp Contig1087            
whxb_13034_p11r 2012 3' Root 201bp Contig1087            
whxb_19065_p18f 2012 5' Root 409bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 108 5.9763e-22
whxb_19065_p18r 2012 3' Root 190bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 59 3.24194e-07
whxc_38054_l16f 2012 5' Root, treated at 50 microM Al for 6h 583bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 281 1.0174e-73
whxc_38054_l16r 2012 3' Root, treated at 50 microM Al for 6h 620bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.67543e-59
whxc_31069_l18r 2012 3' Root, treated at 50 microM Al for 6h 178bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 44 0.0179244
whxd_15071_j17f 2012 5' Root, treated at 50 microM Al for 6h 516bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 138 7.26134e-31
whxd_15071_j17r 2012 3' Root, treated at 50 microM Al for 6h 500bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 154 9.4449e-36
whxe_27041_h09f 2012 5' Seedling, infected with leaf rust 511bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 345 2.93537e-93
whxe_27041_h09r 2012 3' Seedling, infected with leaf rust 611bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 237 2.47712e-60
whxf_31064_a16f 2012 5' Seedling, infected with leaf rust 230bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 151 8.14893e-35
whxf_24010_h04r 2012 3' Seedling, infected with leaf rust 128bp Contig1087            
whxf_7055_i13f 2012 5' Seedling, infected with leaf rust 285bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 52 5.02315e-05
whxf_7055_i13r 2012 3' Seedling, infected with leaf rust 244bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 66 3.38932e-09
whxf_3055_j13f 2012 5' Seedling, infected with leaf rust 562bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 379 2.48684e-103
whxf_3055_j13r 2012 3' Seedling, infected with leaf rust 647bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 227 2.95785e-57
whxf_30067_n17f 2012 5' Seedling, infected with leaf rust 452bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 308 5.16336e-82
whxg_39044_e11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 443bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 301 8.35103e-80
whxg_39044_e11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 482bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 150 1.35965e-34
whxg_40044_e11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 43bp Contig1087            
whxh_4095_a21f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 529bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 142 4.20608e-32
whxh_4095_a21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 502bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 156 2.4855e-36
HX006300 whxi_15005_k01f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 247bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 165 4.09079e-39
HX006301 whxi_16005_k01f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 221bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 148 9.10106e-34
HX006318 whxi_15005_k01r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 358bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 89 3.75701e-16
HX006319 whxi_16005_k01r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 338bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 75 7.27616e-12
HX011186 whxj_7096_b24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 261bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 175 5.28563e-42
HX011194 whxj_7096_b24r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 179bp Contig1087            
HX023498 whxk_17060_f15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 367bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 198 5.67564e-49
HX023512 whxk_17060_f15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 437bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 131 6.55633e-29
HX025294 whxk_3024_i08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 367bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 237 1.10689e-60
HX025308 whxk_3024_i08r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 262bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 36 5.0049
HX045862 whxm_17023_j06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 376bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 244 7.08713e-63
HX055822 whxn_16027_e06f 2012 5' Leaves, plant was grown at constant 23Ž 524bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 357 1.03823e-96
HX055850 whxn_16027_e06r 2012 3' Leaves, plant was grown at constant 23Ž 649bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.87583e-59
HX057245 whxn_14028_f07r 2012 3' Leaves, plant was grown at constant 23Ž 649bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 234 1.87583e-59
HX059901 whxn_39025_h05r 2012 3' Leaves, plant was grown at constant 23Ž 620bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 210 3.38372e-52
HX082089 whxo_22067_m18f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 599bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 372 3.55859e-101
HX082109 whxo_22067_m18r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 575bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 188 1.11453e-45
HX083254 whxo_12017_o05f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 625bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 420 2.21275e-115
HX083272 whxo_12017_o05r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 634bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 224 2.34747e-56
HX117876 whxq_10088_j23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 301bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 193 1.85702e-47
HX157093 whxs_5006_l04f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 744bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 469 4.65973e-130
HX157120 whxs_5006_l04r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 691bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 256 4.03286e-66
HX171253 whxt_17058_g15f 2012 5' Roots, 18 day old plants were grown hydroponically 624bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 420 2.21275e-115
HX171280 whxt_17058_g15r 2012 3' Roots, 18 day old plants were grown hydroponically 789bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 356 4.93818e-96
HX178971 whxt_5083_m21r 2012 3' Roots, 18 day old plants were grown hydroponically 751bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 332 9.13284e-89
HX184063 whxu_8016_b03f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 711bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 257 2.54225e-66
HX190967 whxu_22090_g23f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 708bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 256 4.29305e-66
whyd_12051_e10f 2012 5' Spikelet at late flowering 577bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 378 4.52882e-103
whyd_12051_e10r 2012 3' Spikelet at late flowering 524bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 168 5.237e-40
whyd_25022_j02r 2012 3' Spikelet at late flowering 435bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 149 3.03848e-34
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