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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9
First Previous 1-9 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_20072_j20r 2012 3' Dormant seed with water absorption after breaking 188bp Contig10642       PREDICTED:calcium-dependentproteinkinase1-like[Brachypodiumdistachyon] 67 1.55984e-09
whvs_8041_h09r 2012 3' Liquid cultured tissue 741bp Contig10642       hypotheticalproteinSORBIDRAFT_02g003490[Sorghumbicolor] 242 9.18011e-62
whxd_37090_g23f 2012 5' Root, treated at 50 microM Al for 6h 246bp Contig10642            
whxd_37090_g23r 2012 3' Root, treated at 50 microM Al for 6h 190bp Contig10642            
whxe_32043_f10f 2012 5' Seedling, infected with leaf rust 624bp Contig10642       hypotheticalproteinSORBIDRAFT_02g003490[Sorghumbicolor] 257 1.4347e-66
whxe_32043_f10r 2012 3' Seedling, infected with leaf rust 640bp Contig10642       hypotheticalproteinSORBIDRAFT_02g003490[Sorghumbicolor] 220 2.69925e-55
whxh_11045_d10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 512bp Contig10642       hypotheticalproteinSORBIDRAFT_02g003490[Sorghumbicolor] 247 1.08285e-63
whxh_11045_d10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 594bp Contig10642       PREDICTED:calcium-dependentproteinkinase1-like[Brachypodiumdistachyon] 205 9.72192e-51
whxx_9032_a07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 769bp Contig10642       hypotheticalproteinSORBIDRAFT_02g003490[Sorghumbicolor] 282 8.62381e-74
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