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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 83
First Previous 1-83 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_10023_j02r 2012 3' Crown of seedling 67bp Contig10529            
whdl_6013_k19r 2012 3' Crown of seedling 470bp Contig10529       hypotheticalproteinOsI_22526[OryzasativaIndicaGroup] 38 1.00129
whdp_17028_f08f 2012 5' Seed DPA20 252bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 173 2.55347e-41
whdp_17028_f08r 2012 3' Seed DPA20 581bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 271 7.92915e-71
whf_17083_e24r 2012 3' Spike at flowering date 576bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 189 3.83058e-46
whf_2005_i07r 2012 3' Spike at flowering date 229bp Contig10529       hypotheticalproteinOsI_22526[OryzasativaIndicaGroup] 36 3.8206
whh_20059_d22r 2012 3' Spike at heading date 159bp Contig10529            
whh_14068_e11r 2012 3' Spike at heading date 403bp Contig10529       hypotheticalproteinOsI_22526[OryzasativaIndicaGroup] 37 1.70602
whh_10062_l04r 2012 3' Spike at heading date 405bp Contig10529       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 48 0.000740019
whhg_7042_g12r 2012 3' Anther at meiosis of MT4B CS wheat 688bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 247 3.19543e-63
whhg_10001_p01f 2012 5' Anther at meiosis of MT4B CS wheat 216bp Contig10529            
whhg_9001_p01f 2012 5' Anther at meiosis of MT4B CS wheat 740bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 260 2.49419e-67
whhg_10001_p01r 2012 3' Anther at meiosis of MT4B CS wheat 294bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 194 8.39645e-48
whhg_9001_p01r 2012 3' Anther at meiosis of MT4B CS wheat 719bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 273 3.47964e-71
whkp_4043_f10r 2012 3' Shoot grown under continuous light 673bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 247 3.02363e-63
whkp_4044_f12r 2012 3' Shoot grown under continuous light 421bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 282 2.35866e-74
whkv_14036_m12f 2012 5' Shoot grown with continuous light after cold treatment 727bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 502 6.19219e-140
whkv_14036_m12r 2012 3' Shoot grown with continuous light after cold treatment 718bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 274 2.03996e-71
whms_1001_p02r 2012 3' Seed DPA5 of DT3DL CS wheat 619bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 214 2.3433e-53
whok_19046_c11r 2012 3' Seed DPA5 752bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 243 4.27199e-62
whpc_3010_h04r 2012 3' Anther at meiosis 708bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 269 8.35899e-70
whr_17049_a16r 2012 3' Root 543bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 115 1.02268e-23
whr_7005_f19f 2012 5' Root 228bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 159 3.92133e-37
whr_17076_h11f 2012 5' Root 544bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 368 3.91081e-100
whr_17076_h11r 2012 3' Root 498bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 121 8.90174e-26
whr_19054_i16r 2012 3' Root 180bp Contig10529       hypotheticalproteinOsI_22526[OryzasativaIndicaGroup] 36 2.86167
whr_10071_j17f 2012 5' Root 363bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 250 1.65667e-64
whr_10071_j17r 2012 3' Root 544bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 152 4.42577e-35
whr_15055_m04r 2012 3' Root 529bp Contig10529       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 93 2.24062e-17
whr_2015_o07r 2012 3' Root 380bp Contig10529       predictedprotein[ClavisporalusitaniaeATCC42720] 36 3.79802
whsp_16016_b03r 2012 3' 575bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 146 4.85695e-33
whsp_9011_e02r 2012 3' 614bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 218 9.2494e-55
whsp_4020_m08r 2012 3' 581bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 176 4.53388e-42
whsp_1051_m13r 2012 3' 542bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 124 1.6857e-26
whv3_7061_d13f 2012 5' Shoot grown under cold condition for 3days 696bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 475 5.70214e-132
whv3_7061_d13r 2012 3' Shoot grown under cold condition for 3days 696bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 255 9.1775e-66
whv3_7050_p16r 2012 3' Shoot grown under cold condition for 3days 684bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 240 2.95867e-61
whva_4081_a06f 2012 5' Shoot with ABA treatment 506bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 349 2.04232e-94
whva_4081_a06r 2012 3' Shoot with ABA treatment 555bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 124 1.78046e-26
whva_1042_d15f 2012 5' Shoot with ABA treatment 515bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 352 3.19955e-95
whva_4024_n20f 2012 5' Shoot with ABA treatment 524bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 156 2.68964e-36
whvd_20047_b10r 2012 3' Shoot grown with dessication 332bp Contig10529       predictedprotein[ClavisporalusitaniaeATCC42720] 36 3.7741
whvd_17003_n01r 2012 3' Shoot grown with dessication 688bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 218 1.57247e-54
whvd_15036_n11r 2012 3' Shoot grown with dessication 595bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 311 9.78265e-83
whvd_2051_n14r 2012 3' Shoot grown with dessication 632bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 208 1.02062e-51
whvd_9002_o03r 2012 3' Shoot grown with dessication 687bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 264 1.46497e-68
whvh_11079_b17f 2012 5' Shoot with heat shock treatment 300bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 210 1.46266e-52
whxa_28021_l06r 2012 3' Root 556bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 146 4.4594e-33
whxb_15058_h15f 2012 5' Root 537bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 369 2.9472e-100
whxb_15058_h15r 2012 3' Root 541bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 124 1.65129e-26
whxc_32080_b19f 2012 5' Root, treated at 50 microM Al for 6h 331bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 125 4.74802e-27
whxc_32080_b19r 2012 3' Root, treated at 50 microM Al for 6h 317bp Contig10529       predictedprotein[ClavisporalusitaniaeATCC42720] 36 3.84535
whxc_37092_f24f 2012 5' Root, treated at 50 microM Al for 6h 550bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 375 5.56845e-102
whxc_37092_f24r 2012 3' Root, treated at 50 microM Al for 6h 555bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 146 4.37526e-33
whxd_31092_e23f 2012 5' Root, treated at 50 microM Al for 6h 471bp Contig10529       hypotheticalproteinOsI_22526[OryzasativaIndicaGroup] 38 1.00129
whxd_31092_e23r 2012 3' Root, treated at 50 microM Al for 6h 430bp Contig10529       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 42 0.0691976
whxd_19028_f07r 2012 3' Root, treated at 50 microM Al for 6h 527bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 148 5.73867e-34
whxd_6010_h04f 2012 5' Root, treated at 50 microM Al for 6h 61bp Contig10529            
whxd_23086_l24r 2012 3' Root, treated at 50 microM Al for 6h 122bp Contig10529       PREDICTED:S-adenosylmethioninesynthase3-like[Brachypodiumdistachyon] 88 1.10267e-15
whxd_35004_n03r 2012 3' Root, treated at 50 microM Al for 6h 423bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 218 5.41733e-55
whxd_15002_p04f 2012 5' Root, treated at 50 microM Al for 6h 529bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 361 5.76121e-98
whxd_15002_p04r 2012 3' Root, treated at 50 microM Al for 6h 619bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 208 9.84511e-52
whxe_12039_i09f 2012 5' Seedling, infected with leaf rust 546bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 371 7.88001e-101
whxe_12039_i09r 2012 3' Seedling, infected with leaf rust 542bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 124 1.6857e-26
whxf_11024_j07r 2012 3' Seedling, infected with leaf rust 552bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 172 5.59139e-41
whxh_39058_g16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 582bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 179 4.10072e-43
whxh_23006_l04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 719bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 271 1.32226e-70
HX032179 whxl_12014_d04r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 439bp Contig10529       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 69 3.04661e-10
HX041888 whxm_18077_c18r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 634bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 148 9.7251e-34
HX045924 whxm_8024_j08f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 326bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 222 4.88637e-56
HX045939 whxm_8024_j08r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 359bp Contig10529       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 76 3.2913e-12
HX048237 whxm_17084_m24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 637bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 249 5.35663e-64
HX107467 whxq_12063_a13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 672bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 207 3.42811e-51
HX107468 whxq_13063_a13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 520bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 148 5.47783e-34
HX150559 whxs_4076_f19r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 537bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 266 2.01711e-69
HX156894 whxs_15086_k24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 533bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 165 4.74269e-39
HX162179 whxs_27018_p07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 822bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 285 1.50349e-74
HX162206 whxs_27018_p07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 715bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 247 2.64427e-63
HX176049 whxt_14038_k12r 2012 3' Roots, 18 day old plants were grown hydroponically 730bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 314 1.84858e-83
HX185261 whxu_19014_c03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 697bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 218 1.24326e-54
HX201244 whxu_3049_p14f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 730bp Contig10529       putativeAdoMetsynthase1[Hordeumvulgaresubsp.vulgare] 499 4.05189e-139
HX201272 whxu_3049_p14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 717bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 221 2.04944e-55
whxw_7065_p17r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 711bp Contig10529       S-adenosylmethioninesynthetase2[Triticummonococcum] 247 3.41934e-63
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