Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 56
First Previous 1-56 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_18063_b14r 2012 3' Dormant seed with water absorption after breaking 553bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 180 2.0532e-43
whem_18094_c23r 2012 3' Dormant seed with water absorption 458bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 233 2.09257e-59
whem_1007_j02r 2012 3' Dormant seed with water absorption 428bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 174 8.93329e-42
whf_7002_a01f 2012 5' Spike at flowering date 308bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 128 7.25639e-28
whf_25035_e15f 2012 5' Spike at flowering date 91bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 66 3.39398e-09
whh_24035_e03r 2012 3' Spike at heading date 450bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 240 1.32796e-61
whh_4088_n18r 2012 3' Spike at heading date 339bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 89 4.86927e-16
whkp_16004_m04f 2012 5' Shoot grown under continuous light 733bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 481 8.82551e-134
whkp_16004_m04r 2012 3' Shoot grown under continuous light 729bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 366 5.35365e-99
whms_3011_f02f 2012 5' Seed DPA5 of DT3DL CS wheat 177bp Contig1050            
whms_3011_f02r 2012 3' Seed DPA5 of DT3DL CS wheat 135bp Contig1050       hypotheticalproteinAND_10347[Anophelesdarlingi] 31 3.08975
whoh_27026_d20r 2012 3' Pistil at heading date 526bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 241 6.35741e-62
whok_14043_f09f 2012 5' Seed DPA5 685bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 462 4.73515e-128
whok_15043_f09f 2012 5' Seed DPA5 622bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 422 5.74433e-116
whok_14043_f09r 2012 3' Seed DPA5 50bp Contig1050       mitochondrialaldehydedehydrogenase[Miscanthussinensis] 37 1.09652
whok_17091_f21r 2012 3' Seed DPA5 745bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 371 1.32234e-100
whr_19070_i17r 2012 3' Root 274bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 74 9.58689e-12
whrd_20076_f19r 2012 3' Root of dessiccated seed 575bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 247 1.18526e-63
whrd_18009_h02f 2012 5' Root of dessiccated seed 556bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 210 1.92539e-52
whrd_18009_h02r 2012 3' Root of dessiccated seed 553bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 227 1.1434e-57
whrd_20054_k15r 2012 3' Root of dessiccated seed 638bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 289 3.5764e-76
whrd_6002_o04r 2012 3' Root of dessiccated seed 550bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 174 1.47142e-41
whsd_14076_e19r 2012 3' Shoot grown with dessication 573bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 228 7.44125e-58
whv_162044_e11r 2012 3' Shoot grown under cold condition for 16days 713bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 311 1.13039e-82
whxc_6077_c17f 2012 5' Root, treated at 50 microM Al for 6h 543bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 363 2.15611e-98
whxc_7077_c17f 2012 5' Root, treated at 50 microM Al for 6h 522bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 341 5.75831e-92
whxc_6077_c17r 2012 3' Root, treated at 50 microM Al for 6h 602bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 219 3.91462e-55
whxc_7077_c17r 2012 3' Root, treated at 50 microM Al for 6h 66bp Contig1050            
whxc_36089_g22r 2012 3' Root, treated at 50 microM Al for 6h 40bp Contig1050            
whxd_4048_b11r 2012 3' Root, treated at 50 microM Al for 6h 76bp Contig1050            
whxd_30087_j21f 2012 5' Root, treated at 50 microM Al for 6h 355bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 233 2.12026e-59
whxd_30087_j21r 2012 3' Root, treated at 50 microM Al for 6h 52bp Contig1050       hypotheticalproteinAND_10347[Anophelesdarlingi] 28 9.41356
whxd_26066_o20r 2012 3' Root, treated at 50 microM Al for 6h 613bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 285 8.04669e-75
whxe_26082_o23f 2012 5' Seedling, infected with leaf rust 555bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 371 4.99681e-101
whxe_26082_o23r 2012 3' Seedling, infected with leaf rust 617bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 297 1.21677e-78
whxf_23027_e06r 2012 3' Seedling, infected with leaf rust 448bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 180 1.63086e-43
whxh_2068_n20r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 639bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 307 2.19281e-81
HX035250 whxl_3007_i02f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 495bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 329 2.16219e-88
HX044058 whxm_2025_g06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 372bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 110 2.09434e-22
HX057704 whxn_23060_f15r 2012 3' Leaves, plant was grown at constant 23 630bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 307 2.11862e-81
HX098286 whxp_7071_j18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 629bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 289 3.50027e-76
HX123726 whxq_15017_p05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 634bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 416 2.50057e-114
HX123727 whxq_16017_p05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 617bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 412 3.38949e-113
HX123745 whxq_15017_p05r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 613bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 291 8.47434e-77
HX123746 whxq_16017_p05r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 575bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 268 6.48868e-70
HX137272 whxr_9053_k14f 2012 5' Roots, 18 day old plants were grown hydroponically 776bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 408 8.11381e-112
HX137298 whxr_9053_k14r 2012 3' Roots, 18 day old plants were grown hydroponically 657bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 319 6.00525e-85
HX142364 whxr_30066_o20f 2012 5' Roots, 18 day old plants were grown hydroponically 793bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 350 3.59602e-94
HX142391 whxr_30066_o20r 2012 3' Roots, 18 day old plants were grown hydroponically 733bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 347 2.5735e-93
HX152633 whxs_14057_h13r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 787bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 393 4.76088e-107
HX183797 whxu_9095_a21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 587bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 210 2.24167e-52
HX183821 whxu_9095_a21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 561bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 237 1.95718e-60
HX193929 whxu_14040_j11f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 604bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 229 4.94054e-58
HX193951 whxu_14040_j11r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 598bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 265 8.03992e-69
whxy_8072_i20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 753bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 345 1.04251e-92
whxy_8072_i20r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 764bp Contig1050       mitochondrialaldehydedehydrogenase[Secalecereale] 354 1.75544e-95
page-top