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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 101
First Previous 1-100 101-101 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_14031_a06f 2012 5' Callus 710bp Contig10192       ribosomalproteinL3[Triticumaestivum] 470 1.46301e-130
whcs_14031_a06r 2012 3' Callus 755bp Contig10192       ribosomalproteinL3[Triticumaestivum] 453 2.09961e-125
whcs_6043_f10f 2012 5' Callus 686bp Contig10192       ribosomalproteinL3[Triticumaestivum] 465 4.32982e-129
whdl_3019_e20f 2012 5' Crown of seedling 277bp Contig10192       ribosomalproteinL3[Triticumaestivum] 184 8.53016e-45
whdp_1029_c05f 2012 5' Seed DPA20 503bp Contig10192       ribosomalproteinL3[Triticumaestivum] 344 6.40566e-93
whdp_1029_c05r 2012 3' Seed DPA20 553bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.61163e-86
whe_23001_a01f 2012 5' Seed DPA10 412bp Contig10192       ribosomalproteinL3[Triticumaestivum] 290 1.10435e-76
whe_11019_e08f 2012 5' Seed DPA10 324bp Contig10192       ribosomalproteinL3[Triticumaestivum] 184 8.64528e-45
whe_11019_e08r 2012 3' Seed DPA10 505bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 4.90636e-64
whei_12033_o09f 2012 5' Dormant seed with water absorption after breaking 168bp Contig10192       PREDICTED:60SribosomalproteinL3-like[Brachypodiumdistachyon] 118 5.79978e-25
whei_12033_o09r 2012 3' Dormant seed with water absorption after breaking 185bp Contig10192       PREDICTED:60SribosomalproteinL3-like[Brachypodiumdistachyon] 135 6.11109e-30
whem_7094_d24f 2012 5' Dormant seed with water absorption 571bp Contig10192       ribosomalproteinL3[Triticumaestivum] 352 3.29892e-95
whem_7094_d24r 2012 3' Dormant seed with water absorption 618bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 6.01083e-94
whem_14058_h16f 2012 5' Dormant seed with water absorption 417bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.26707e-48
whem_14058_h16r 2012 3' Dormant seed with water absorption 368bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 6.47873e-53
whhg_15064_a15r 2012 3' Anther at meiosis of MT4B CS wheat 704bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 399 5.30158e-109
whhg_1046_c11f 2012 5' Anther at meiosis of MT4B CS wheat 465bp Contig10192       ribosomalproteinL3[Triticumaestivum] 319 2.26021e-85
whhg_19019_m06f 2012 5' Anther at meiosis of MT4B CS wheat 727bp Contig10192       ribosomalproteinL3[Triticumaestivum] 492 3.75667e-137
whhg_19019_m06r 2012 3' Anther at meiosis of MT4B CS wheat 738bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 6.85232e-118
whms_18005_k02f 2012 5' Seed DPA5 of DT3DL CS wheat 346bp Contig10192       ribosomalproteinL3[Triticumaestivum] 232 2.80124e-59
whms_14035_m10f 2012 5' Seed DPA5 of DT3DL CS wheat 515bp Contig10192       ribosomalproteinL3[Triticumaestivum] 348 3.53752e-94
whms_14035_m10r 2012 3' Seed DPA5 of DT3DL CS wheat 576bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 4.63933e-76
whok_14073_h17r 2012 3' Seed DPA5 759bp Contig10192       ribosomalproteinL3[Triticumaestivum] 442 4.88285e-122
whok_12072_i20f 2012 5' Seed DPA5 693bp Contig10192       ribosomalproteinL3[Triticumaestivum] 463 1.69898e-128
whok_12072_i20r 2012 3' Seed DPA5 762bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 7.3599e-118
whpc_12008_i03f 2012 5' Anther at meiosis 751bp Contig10192       ribosomalproteinL3[Triticumaestivum] 502 6.66398e-140
whpc_12008_i03r 2012 3' Anther at meiosis 745bp Contig10192       ribosomalproteinL3[Triticumaestivum] 467 1.78679e-129
whr_21081_a24f 2012 5' Root 503bp Contig10192       ribosomalproteinL3[Triticumaestivum] 338 3.5149e-91
whr_21081_a24r 2012 3' Root 489bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 8.29241e-72
whr_17079_o05r 2012 3' Root 502bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 5.27675e-71
whr_18080_o05r 2012 3' Root 273bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.37156e-42
whrd_5030_c08f 2012 5' Root of dessiccated seed 606bp Contig10192       ribosomalproteinL3[Triticumaestivum] 417 1.00913e-114
whrd_5030_c08r 2012 3' Root of dessiccated seed 685bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 8.66959e-114
whsc_16048_a12f 2012 5' Shoot grown with cold treatment 518bp Contig10192       ribosomalproteinL3[Triticumaestivum] 348 3.6238e-94
whsc_16048_a12r 2012 3' Shoot grown with cold treatment 615bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 5.7134e-105
whsc_8087_j22f 2012 5' Shoot grown with cold treatment 549bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 2.95265e-103
whsl_5079_o11r 2012 3' Seed DPA30 408bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 4.83256e-64
whsp_17074_g19f 2012 5' 542bp Contig10192       ribosomalproteinL3[Triticumaestivum] 366 2.54693e-99
whsp_8057_h14r 2012 3' 730bp Contig10192       ribosomalproteinL3-B2[Triticumaestivum] 328 4.44771e-100
whsp_10050_o15r 2012 3' 758bp Contig10192       ribosomalproteinL3[Triticumaestivum] 461 1.01578e-127
whsp_6018_p07r 2012 3' 638bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 6.25464e-105
whv3_17047_a10f 2012 5' Shoot grown under cold condition for 3days 708bp Contig10192       ribosomalproteinL3[Triticumaestivum] 470 1.46301e-130
whv3_18047_a10r 2012 3' Shoot grown under cold condition for 3days 723bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 419 3.9647e-115
whv3_1095_b21r 2012 3' Shoot grown under cold condition for 3days 661bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 3.55427e-93
whva_12073_h17r 2012 3' Shoot with ABA treatment 541bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.74653e-69
whva_17051_n14f 2012 5' Shoot with ABA treatment 591bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 5.1907e-89
whva_17051_n14r 2012 3' Shoot with ABA treatment 543bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 4.2079e-94
whvd_3062_c16f 2012 5' Shoot grown with dessication 687bp Contig10192       ribosomalproteinL3[Triticumaestivum] 455 7.72593e-126
whvd_3062_c16r 2012 3' Shoot grown with dessication 677bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 2.72762e-112
whvh_5016_a03r 2012 3' Shoot with heat shock treatment 269bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 128 9.57626e-28
whvh_6030_d08r 2012 3' Shoot with heat shock treatment 300bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 2.52151e-28
whvh_10066_o20f 2012 5' Shoot with heat shock treatment 693bp Contig10192       ribosomalproteinL3[Triticumaestivum] 455 7.89208e-126
whvh_10066_o20r 2012 3' Shoot with heat shock treatment 530bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.8149e-66
whvs_4090_g24f 2012 5' Liquid cultured tissue 707bp Contig10192       ribosomalproteinL3[Triticumaestivum] 463 1.77052e-128
whvs_4090_g24r 2012 3' Liquid cultured tissue 779bp Contig10192       ribosomalproteinL3[Triticumaestivum] 456 4.46852e-126
whvs_18018_o07f 2012 5' Liquid cultured tissue 472bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 4.54535e-62
whvs_18018_o07r 2012 3' Liquid cultured tissue 437bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.35132e-66
whxa_3030_d08f 2012 5' Root 565bp Contig10192       ribosomalproteinL3[Triticumaestivum] 375 3.59099e-102
whxa_3030_d08r 2012 3' Root 643bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 6.54141e-110
whxa_28092_e23f 2012 5' Root 483bp Contig10192       ribosomalproteinL3[Triticumaestivum] 319 1.69227e-85
whxa_28092_e23r 2012 3' Root 297bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 3.6158e-51
whxa_3027_f06r 2012 3' Root 620bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 387 1.54648e-105
whxa_19092_f23f 2012 5' Root 442bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.30039e-48
whxa_19092_f23r 2012 3' Root 390bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 3.23449e-52
whxa_20057_h13f 2012 5' Root 584bp Contig10192       ribosomalproteinL3[Triticumaestivum] 388 5.90946e-106
whxa_20057_h13r 2012 3' Root 639bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 2.37676e-104
whxa_5054_k15f 2012 5' Root 391bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 8.15419e-72
whxb_40071_i17r 2012 3' Root 756bp Contig10192       ribosomalproteinL3[Triticumaestivum] 455 7.27955e-126
whxb_8084_m23f 2012 5' Root 558bp Contig10192       ribosomalproteinL3[Triticumaestivum] 388 6.86488e-106
whxb_29020_n08f 2012 5' Root 597bp Contig10192       ribosomalproteinL3[Triticumaestivum] 408 5.88012e-112
whxb_30020_n08f 2012 5' Root 616bp Contig10192       ribosomalproteinL3[Triticumaestivum] 423 2.50787e-116
whxb_31020_n08f 2012 5' Root 615bp Contig10192       ribosomalproteinL3[Triticumaestivum] 417 1.35673e-114
whxb_29020_n08r 2012 3' Root 623bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.15934e-106
whxb_30020_n08r 2012 3' Root 619bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 3.17983e-103
whxb_31020_n08r 2012 3' Root 435bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 2.81662e-80
whxc_34093_c22f 2012 5' Root, treated at 50 microM Al for 6h 355bp Contig10192       ribosomalproteinL3[Triticumaestivum] 243 1.56271e-62
whxc_34093_c22r 2012 3' Root, treated at 50 microM Al for 6h 437bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.35132e-66
whxc_12028_f08f 2012 5' Root, treated at 50 microM Al for 6h 517bp Contig10192       ribosomalproteinL3[Triticumaestivum] 352 2.44981e-95
whxc_12028_f08r 2012 3' Root, treated at 50 microM Al for 6h 567bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 1.81859e-77
whxc_25054_k16f 2012 5' Root, treated at 50 microM Al for 6h 377bp Contig10192       ribosomalproteinL3[Triticumaestivum] 242 4.57558e-62
whxc_25054_k16r 2012 3' Root, treated at 50 microM Al for 6h 309bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 3.25725e-28
whxc_16084_n24f 2012 5' Root, treated at 50 microM Al for 6h 465bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 8.29963e-88
whxc_16084_n24r 2012 3' Root, treated at 50 microM Al for 6h 536bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.79529e-76
whxc_19034_p12f 2012 5' Root, treated at 50 microM Al for 6h 637bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 3.8122e-86
whxc_19034_p12r 2012 3' Root, treated at 50 microM Al for 6h 517bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 1.38344e-77
whxd_38093_c21f 2012 5' Root, treated at 50 microM Al for 6h 600bp Contig10192       ribosomalproteinL3[Triticumaestivum] 408 4.54973e-112
whxd_38093_c21r 2012 3' Root, treated at 50 microM Al for 6h 509bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 1.32376e-77
whxd_21037_l09r 2012 3' Root, treated at 50 microM Al for 6h 575bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 283 1.94916e-74
HX009902 whxi_5066_p20r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 320bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 7.14184e-39
HX028382 whxk_17003_n01f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 499bp Contig10192       ribosomalproteinL3[Triticumaestivum] 335 2.98939e-90
HX028397 whxk_17003_n01r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 351bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.74255e-45
HX028411 whxk_17003_n02f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 517bp Contig10192       ribosomalproteinL3[Triticumaestivum] 347 1.05436e-93
HX028425 whxk_17003_n02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 351bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.74928e-45
HX065849 whxn_25053_l14r 2012 3' Leaves, plant was grown at constant 23Ž 606bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.54613e-94
HX180347 whxt_4001_o01f 2012 5' Roots, 18 day old plants were grown hydroponically 786bp Contig10192       ribosomalproteinL3[Triticumaestivum] 535 7.75697e-150
HX180374 whxt_4001_o01r 2012 3' Roots, 18 day old plants were grown hydroponically 842bp Contig10192       ribosomalproteinL3[Triticumaestivum] 519 4.98409e-145
whxy_1070_k19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 694bp Contig10192       ribosomalproteinL3[Triticumaestivum] 455 7.89208e-126
whyd_23003_e07f 2012 5' Spikelet at late flowering 487bp Contig10192       ribosomalproteinL3[Triticumaestivum] 320 1.3238e-85
whyd_23003_e07r 2012 3' Spikelet at late flowering 421bp Contig10192       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.52954e-57
whyd_18030_l08f 2012 5' Spikelet at late flowering 494bp Contig10192       ribosomalproteinL3[Triticumaestivum] 332 3.33578e-89
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