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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 53
First Previous 1-53 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
HX019957 whxk_8031_a05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 362bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.95696e-65
HX019971 whxk_8031_a05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 287bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 6.13146e-06
HX020345 whxk_15080_a20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 387bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.5133e-69
HX020346 whxk_16080_a20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 368bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.94166e-65
HX020359 whxk_15080_a20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 370bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 118 5.71527e-25
HX020360 whxk_16080_a20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 396bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 143 2.23472e-32
HX021854 whxk_3014_d04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 429bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 296 2.6475e-78
HX021855 whxk_4014_d04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 424bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 9.1765e-79
HX021867 whxk_3014_d04r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 336bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 2.95845e-21
HX021868 whxk_4014_d04r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 281bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 71 8.02971e-11
HX021947 whxk_3030_d07f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 554bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 1.63203e-96
HX021959 whxk_3030_d07r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 329bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 2.98088e-21
HX022022 whxk_17045_d10f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 442bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 4.03256e-79
HX022034 whxk_17045_d10r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 356bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 6.00757e-22
HX022430 whxk_15011_e02f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 363bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.95696e-65
HX022443 whxk_15011_e02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 418bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 171 9.72417e-41
HX022785 whxk_14059_e14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 371bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 4.76153e-67
HX022799 whxk_14059_e14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 621bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.00961e-80
HX023111 whxk_15011_f02f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 378bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 1.97686e-65
HX023126 whxk_15011_f02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 414bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 173 1.96752e-41
HX023528 whxk_20060_f16f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 417bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 4.78149e-72
HX023543 whxk_20060_f16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 460bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 205 6.07579e-51
HX024149 whxk_5057_g14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 134bp Contig11259            
HX024423 whxk_16090_g24f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 398bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.62404e-69
HX024439 whxk_16090_g24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 475bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 200 1.50987e-49
HX024688 whxk_2041_h09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 443bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.09068e-79
HX024689 whxk_3041_h09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 404bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 272 4.11528e-71
HX024702 whxk_2041_h09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 340bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.91589e-22
HX024703 whxk_3041_h09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 341bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 103 1.90308e-20
HX024865 whxk_4058_h16f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 443bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 4.4281e-81
HX024866 whxk_5058_h16f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 345bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 1.58696e-62
HX024876 whxk_4058_h16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 292bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 3.02119e-05
HX024877 whxk_5058_h16r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 452bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 173 1.98496e-41
HX024996 whxk_6089_h21f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 389bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.48712e-69
HX025008 whxk_6089_h21r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 361bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.96097e-22
HX025209 whxk_4023_i05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 395bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.65098e-69
HX025222 whxk_4023_i05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 278bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 1.08913e-07
HX025223 whxk_5023_i05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 191bp Contig11259       PREDICTED:hypotheticalproteinLOC100565328[Anoliscarolinensis] 35 8.55124
HX026038 whxk_18040_j11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 356bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.27838e-64
HX026052 whxk_18040_j11r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 358bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 118 5.78281e-25
HX026645 whxk_20037_k09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 440bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 171 9.7101e-41
HX027083 whxk_15005_l01f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 293bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 6.65291e-45
HX027099 whxk_15005_l01r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 335bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 97 1.37425e-18
HX027260 whxk_16022_l07f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 316bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 224 7.38511e-57
HX027274 whxk_16022_l07r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 388bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 146 3.37631e-33
HX029303 whxk_18034_o12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 395bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.65098e-69
HX029315 whxk_18034_o12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 357bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 2.96996e-21
HX029391 whxk_9050_o15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 379bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 1.91792e-68
HX029406 whxk_9050_o15r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 177bp Contig11259       PREDICTED:hypotheticalproteinLOC100565328[Anoliscarolinensis] 35 8.35298
HX029751 whxk_10017_p06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 394bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.46095e-69
HX029763 whxk_10017_p06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 339bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 2.94724e-21
HX029945 whxk_12049_p14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 443bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 4.4281e-81
HX029958 whxk_12049_p14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 252bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.94877e-05
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