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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 50
First Previous 1-50 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_4078_c20f 2012 5' Dormant seed with water absorption after breaking 455bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 279 1.95807e-73
whv_164049_p14f 2012 5' Shoot grown under cold condition for 16days 681bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 420 1.56261e-115
whv_164049_p14r 2012 3' Shoot grown under cold condition for 16days 746bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 361 1.38085e-97
whv3_19027_e06r 2012 3' Shoot grown under cold condition for 3days 663bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.73e-82
whva_12053_k14f 2012 5' Shoot with ABA treatment 363bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 237 8.50839e-61
whva_12053_k14r 2012 3' Shoot with ABA treatment 597bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.60853e-77
whva_4078_l23f 2012 5' Shoot with ABA treatment 483bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 227 8.7519e-58
whva_4078_l23r 2012 3' Shoot with ABA treatment 573bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 271 9.83801e-71
whvd_6080_b20f 2012 5' Shoot grown with dessication 181bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.27564e-24
whvd_6080_b20r 2012 3' Shoot grown with dessication 646bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.97025e-77
whvh_11079_a18f 2012 5' Shoot with heat shock treatment 750bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 449 3.89022e-124
whvh_11079_a18r 2012 3' Shoot with heat shock treatment 660bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 5.8858e-80
whvh_13045_d10r 2012 3' Shoot with heat shock treatment 727bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 9.33924e-104
whvh_17022_l07f 2012 5' Shoot with heat shock treatment 680bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 425 8.28567e-117
whvh_17022_l07r 2012 3' Shoot with heat shock treatment 711bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 361 1.25005e-97
whvs_11032_a07f 2012 5' Liquid cultured tissue 342bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 7.65505e-54
whvs_11032_a07r 2012 3' Liquid cultured tissue 714bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 376 4.88058e-102
whxb_5080_a19r 2012 3' Root 252bp Contig23565       hypotheticalproteinSORBIDRAFT_03g006130[Sorghumbicolor] 63 3.72157e-08
whxb_6024_j08r 2012 3' Root 400bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 169 3.78762e-40
whxb_11072_j19f 2012 5' Root 280bp Contig23565            
whxb_11072_j19r 2012 3' Root 278bp Contig23565       hypotheticalproteinSORBIDRAFT_03g006130[Sorghumbicolor] 63 3.74327e-08
whxb_6085_k21f 2012 5' Root 586bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 351 8.00541e-95
whxb_6085_k21r 2012 3' Root 291bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 104 1.49785e-20
whxb_1070_l19r 2012 3' Root 428bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 198 7.54496e-49
whxb_34020_n07r 2012 3' Root 542bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 256 2.1762e-66
whxd_13077_d17f 2012 5' Root, treated at 50 microM Al for 6h 492bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 162 3.51644e-38
whxd_13077_d17r 2012 3' Root, treated at 50 microM Al for 6h 479bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 194 8.24773e-48
whxd_32092_e24r 2012 3' Root, treated at 50 microM Al for 6h 501bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 247 8.19773e-64
whxd_12008_j04f 2012 5' Root, treated at 50 microM Al for 6h 574bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 269 3.73844e-70
whxd_12008_j04r 2012 3' Root, treated at 50 microM Al for 6h 598bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.60853e-77
whxd_33021_l05r 2012 3' Root, treated at 50 microM Al for 6h 586bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 275 7.41067e-72
whxd_39034_o12f 2012 5' Root, treated at 50 microM Al for 6h 463bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 157 1.49213e-36
whxd_39034_o12r 2012 3' Root, treated at 50 microM Al for 6h 290bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 104 1.49785e-20
whxd_14033_p09f 2012 5' Root, treated at 50 microM Al for 6h 485bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 233 2.13792e-59
whxd_14033_p09r 2012 3' Root, treated at 50 microM Al for 6h 529bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 241 8.68922e-62
whxe_8079_b17r 2012 3' Seedling, infected with leaf rust 620bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.78176e-77
whxe_17007_i02f 2012 5' Seedling, infected with leaf rust 44bp Contig23565            
whxe_18007_i02f 2012 5' Seedling, infected with leaf rust 480bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 166 2.39445e-39
whxe_17007_i02r 2012 3' Seedling, infected with leaf rust 509bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 237 1.12584e-60
whxe_33084_m23r 2012 3' Seedling, infected with leaf rust 580bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.49191e-77
whxh_16084_n23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 363bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 227 8.8048e-58
HX044881 whxm_5058_h15f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 318bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 206 2.80584e-51
HX127621 whxr_14061_c13r 2012 3' Roots, 18 day old plants were grown hydroponically 421bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 192 3.1967e-47
HX132590 whxr_25073_g17f 2012 5' Roots, 18 day old plants were grown hydroponically 821bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 482 4.91305e-134
HX137881 whxr_2005_l02f 2012 5' Roots, 18 day old plants were grown hydroponically 804bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 476 4.4486e-132
HX137904 whxr_2005_l02r 2012 3' Roots, 18 day old plants were grown hydroponically 633bp Contig23565       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.29628e-82
HX142311 whxr_30066_o19f 2012 5' Roots, 18 day old plants were grown hydroponically 394bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 112 5.51709e-23
HX142337 whxr_30066_o19r 2012 3' Roots, 18 day old plants were grown hydroponically 390bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 155 5.54286e-36
HX155307 whxs_13071_j17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 714bp Contig23565       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 363 3.27371e-98
HX159050 whxs_11068_m19f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 770bp Contig23565       triosephosphat-isomerase[Triticumaestivum] 449 5.32697e-124
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