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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 42
First Previous 1-42 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ287714 whsl10i16 2002 5' Seed DPA30 395bp Contig16009 Contig16009 Q09712 P15727 P15727 GO:0016021 GO:0009877 GO:0046821 integral to membrane ,  nodulation ,  extrachromosomal DNA PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 73 9.57836
BJ287949 whsl11o06 2002 5' Seed DPA30 260bp Contig16009 Contig16009 Q01085 GO:0006915 apoptosis      
BJ288050 whsl12h21 2002 5' Seed DPA30 587bp Contig16009 Contig16009 Q9XF89 GO:0009579 thylakoid Late embryogenesis abundant protein B19.1A (B19.1) 386 8.55128e-36
BJ293621 whsl17g07 2002 5' Seed DPA30 580bp Contig16009 Contig16009 Q9CR62 GO:0016021 integral to membrane Late embryogenesis abundant protein B19.1A (B19.1) 386 8.29977e-36
BJ293668 whsl17j20 2002 5' Seed DPA30 418bp Contig16009 Contig16009 P59169 P15727 P15727 GO:0005694 GO:0009877 GO:0046821 chromosome ,  nodulation ,  extrachromosomal DNA PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 73 9.58237
BJ290380 whsl18f06 2002 5' Seed DPA30 626bp Contig16009 Contig16009 P20973 GO:0016874 ligase activity Late embryogenesis abundant protein B19.1A (B19.1) 386 9.84366e-36
BJ290663 whsl19l22 2002 5' Seed DPA30 400bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 120 3.48472e-05
BJ292272 whsl27a12 2002 5' Seed DPA30 294bp Contig16009 Contig16009 P15727 P15727 GO:0009877 GO:0046821 nodulation ,  extrachromosomal DNA PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 73 9.8225
BJ292334 whsl27e13 2002 5' Seed DPA30 379bp Contig16009 Contig16009       PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 73 9.77106
BJ292336 whsl27e18 2002 5' Seed DPA30 439bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 77 0.0149264
BJ292501 whsl28a12 2002 5' Seed DPA30 296bp Contig16009 Contig16009 P15727 P15727 GO:0009877 GO:0046821 nodulation ,  extrachromosomal DNA PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 73 9.78737
BJ292563 whsl28e13 2002 5' Seed DPA30 249bp Contig16009 Contig16009            
BJ292827 whsl29f23 2002 5' Seed DPA30 585bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 8.55128e-36
BJ288976 whsl2j01 2002 5' Seed DPA30 453bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 215 3.32202e-16
BJ289059 whsl2p14 2002 5' Seed DPA30 332bp Contig16009 Contig16009 P11678 P11678 GO:0004601 GO:0016491 peroxidase activity ,  oxidoreductase activity PREDICTED: similar to Integral membrane protein 2B [Monodelphis domestica] 75 5.68908
BJ293783 whsl32c11 2002 5' Seed DPA30 520bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1B 296 1.66271e-25
BJ293834 whsl32g11 2002 5' Seed DPA30 234bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 215 3.3347e-16
BJ289479 whsl5i13 2002 5' Seed DPA30 231bp Contig16009 Contig16009 Q99156 Q99156 GO:0016042 GO:0016787 lipid catabolism ,  hydrolase activity      
BJ289660 whsl6h20 2002 5' Seed DPA30 585bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 351 9.64004e-32
BJ289664 whsl6i05 2002 5' Seed DPA30 678bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 1.17826e-35
BJ289681 whsl6j15 2002 5' Seed DPA30 307bp Contig16009 Contig16009 P47760 GO:0003735 structural constituent of ribosome      
BJ294015 rwhsl10i16 2002 3' Seed DPA30 351bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 88 0.178968
BJ294276 rwhsl11o06 2002 3' Seed DPA30 349bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 127 5.37611e-06
BJ294383 rwhsl12h21 2002 3' Seed DPA30 619bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 9.76394e-36
BJ294718 rwhsl15e18 2002 3' Seed DPA30 360bp Contig16009 Contig16009       Early-methionine-labelled polypeptide [Secale cereale] 196 5.28193e-14
BJ300066 rwhsl17g07 2002 3' Seed DPA30 627bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 9.84366e-36
BJ300120 rwhsl17j20 2002 3' Seed DPA30 386bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 127 5.30694e-06
BJ296922 rwhsl18f06 2002 3' Seed DPA30 647bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 1.07159e-35
BJ297232 rwhsl19k03 2002 3' Seed DPA30 654bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 1.09651e-35
BJ297259 rwhsl19l22 2002 3' Seed DPA30 376bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 120 3.48089e-05
BJ297523 rwhsl20l22 2002 3' Seed DPA30 159bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 108 0.000857395
BJ297891 rwhsl22i18 2002 3' Seed DPA30 453bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 300 4.64473e-26
BJ298851 rwhsl27a12 2002 3' Seed DPA30 270bp Contig16009 Contig16009 P15727 P15727 GO:0009877 GO:0046821 nodulation ,  extrachromosomal DNA      
BJ298962 rwhsl28a12 2002 3' Seed DPA30 197bp Contig16009 Contig16009 O13370 O13370 O13370 O13370 O13370 GO:0003723 GO:0004386 GO:0005524 GO:0007049 GO:0007067 RNA binding ,  helicase activity ,  ATP binding ,  cell cycle ,  mitosis      
BJ299246 rwhsl29f23 2002 3' Seed DPA30 575bp Contig16009 Contig16009       Em protein H2 298 2.29717e-30
BJ295263 rwhsl2j01 2002 3' Seed DPA30 447bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1B 235 1.60696e-18
BJ295342 rwhsl2p14 2002 3' Seed DPA30 373bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 109 0.000639662
BJ299853 rwhsl32c11 2002 3' Seed DPA30 454bp Contig16009 Contig16009       Em protein H2 298 7.88865e-26
BJ295806 rwhsl5i13 2002 3' Seed DPA30 205bp Contig16009 Contig16009 Q9WRL5 GO:0016021 integral to membrane      
BJ295986 rwhsl6h20 2002 3' Seed DPA30 564bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 347 2.55365e-31
BJ295991 rwhsl6i05 2002 3' Seed DPA30 578bp Contig16009 Contig16009       Late embryogenesis abundant protein B19.1A (B19.1) 386 8.17402e-36
BJ296011 rwhsl6j15 2002 3' Seed DPA30 387bp Contig16009 Contig16009       embryonic abundant protein [Bromus inermis] 106 0.00143947
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