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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 84
First Previous 1-84 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_163032_a07f 2012 5' Shoot grown under cold condition for 16days 762bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv_163032_a07r 2012 3' Shoot grown under cold condition for 16days 731bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.48687e-96
whv_1617047_a09f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.92374e-97
whv_1617047_a09r 2012 3' Shoot grown under cold condition for 16days 689bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.3479e-90
whv_161048_a12f 2012 5' Shoot grown under cold condition for 16days 723bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.37192e-98
whv_161048_a12r 2012 3' Shoot grown under cold condition for 16days 701bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.44888e-90
whv_1617095_a21f 2012 5' Shoot grown under cold condition for 16days 650bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.59484e-97
whv_1618095_a21f 2012 5' Shoot grown under cold condition for 16days 613bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 280 1.98197e-73
whv_1617095_a21r 2012 3' Shoot grown under cold condition for 16days 699bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.20284e-89
whv_1618095_a21r 2012 3' Shoot grown under cold condition for 16days 666bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 2.41772e-81
whv_1613080_b19f 2012 5' Shoot grown under cold condition for 16days 519bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 116 3.02698e-24
whv_1613080_b19r 2012 3' Shoot grown under cold condition for 16days 494bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 135 7.81611e-30
whv_168030_c07f 2012 5' Shoot grown under cold condition for 16days 650bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv_168030_c07r 2012 3' Shoot grown under cold condition for 16days 694bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.32488e-92
whv_1619030_c08f 2012 5' Shoot grown under cold condition for 16days 768bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_1619030_c08r 2012 3' Shoot grown under cold condition for 16days 672bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.16464e-91
whv_1617046_c12r 2012 3' Shoot grown under cold condition for 16days 300bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 8.38287e-16
whv_1619078_c19r 2012 3' Shoot grown under cold condition for 16days 552bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 4.37925e-78
whv_1611046_d12f 2012 5' Shoot grown under cold condition for 16days 697bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_1611046_d12r 2012 3' Shoot grown under cold condition for 16days 636bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.26784e-85
whv_165012_e03f 2012 5' Shoot grown under cold condition for 16days 768bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_167012_e03f 2012 5' Shoot grown under cold condition for 16days 749bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.66656e-98
whv_165012_e03r 2012 3' Shoot grown under cold condition for 16days 676bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_167012_e03r 2012 3' Shoot grown under cold condition for 16days 640bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.33033e-78
whv_1616027_e05f 2012 5' Shoot grown under cold condition for 16days 651bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv_1616027_e05r 2012 3' Shoot grown under cold condition for 16days 667bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.09534e-89
whv_165044_f11f 2012 5' Shoot grown under cold condition for 16days 677bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv_165044_f11r 2012 3' Shoot grown under cold condition for 16days 669bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv_165044_f12f 2012 5' Shoot grown under cold condition for 16days 732bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.47014e-98
whv_165044_f12r 2012 3' Shoot grown under cold condition for 16days 720bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.26889e-97
whv_163059_f14r 2012 3' Shoot grown under cold condition for 16days 710bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.60094e-92
whv_164075_f18f 2012 5' Shoot grown under cold condition for 16days 756bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_164075_f18r 2012 3' Shoot grown under cold condition for 16days 759bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.69802e-96
whv_1616092_f23f 2012 5' Shoot grown under cold condition for 16days 561bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 6.44025e-96
whv_1616092_f23r 2012 3' Shoot grown under cold condition for 16days 694bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.65173e-89
whv_1616009_g01f 2012 5' Shoot grown under cold condition for 16days 652bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.67626e-97
whv_1616009_g01r 2012 3' Shoot grown under cold condition for 16days 689bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 346 3.87008e-93
whv_1616009_g02f 2012 5' Shoot grown under cold condition for 16days 160bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 1.22085e-22
whv_165025_h05f 2012 5' Shoot grown under cold condition for 16days 189bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.25764
whv_164074_h19f 2012 5' Shoot grown under cold condition for 16days 417bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.14703e-28
whv_164074_h19r 2012 3' Shoot grown under cold condition for 16days 375bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 139 4.19359e-31
whv_1610089_h21f 2012 5' Shoot grown under cold condition for 16days 735bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv_1610089_h21r 2012 3' Shoot grown under cold condition for 16days 670bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.87671e-84
whv_1620007_j01f 2012 5' Shoot grown under cold condition for 16days 746bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv_1620007_j01r 2012 3' Shoot grown under cold condition for 16days 666bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv_1617040_j11r 2012 3' Shoot grown under cold condition for 16days 42bp Contig6435            
whv_166072_j19f 2012 5' Shoot grown under cold condition for 16days 769bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_166072_j19r 2012 3' Shoot grown under cold condition for 16days 717bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.23569e-97
whv_1610072_j20f 2012 5' Shoot grown under cold condition for 16days 752bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_1610072_j20r 2012 3' Shoot grown under cold condition for 16days 715bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.62448e-92
whv_166087_j21f 2012 5' Shoot grown under cold condition for 16days 773bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.87679e-98
whv_166087_j21r 2012 3' Shoot grown under cold condition for 16days 709bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 338 1.13325e-90
whv_161069_k18f 2012 5' Shoot grown under cold condition for 16days 739bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 5.16465e-89
whv_161069_k18r 2012 3' Shoot grown under cold condition for 16days 670bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.87671e-84
whv_1610086_k24f 2012 5' Shoot grown under cold condition for 16days 753bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_1610086_k24r 2012 3' Shoot grown under cold condition for 16days 654bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whv_1618005_l02f 2012 5' Shoot grown under cold condition for 16days 624bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.42464e-98
whv_1618005_l02r 2012 3' Shoot grown under cold condition for 16days 630bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.1899e-85
whv_165006_l03f 2012 5' Shoot grown under cold condition for 16days 770bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_165006_l03r 2012 3' Shoot grown under cold condition for 16days 722bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.41648e-96
whv_163022_l08f 2012 5' Shoot grown under cold condition for 16days 692bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_163022_l08r 2012 3' Shoot grown under cold condition for 16days 663bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.84275e-98
whv_1618053_l13f 2012 5' Shoot grown under cold condition for 16days 527bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 7.12599e-93
whv_1618053_l13r 2012 3' Shoot grown under cold condition for 16days 376bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 223 2.19948e-56
whv_162035_m10r 2012 3' Shoot grown under cold condition for 16days 72bp Contig6435       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 54 1.62738e-05
whv_1620051_m14r 2012 3' Shoot grown under cold condition for 16days 48bp Contig6435            
whv_168083_m22f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_168083_m22r 2012 3' Shoot grown under cold condition for 16days 659bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.33473e-92
whv_1613004_n04f 2012 5' Shoot grown under cold condition for 16days 765bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_1613004_n04r 2012 3' Shoot grown under cold condition for 16days 640bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.31328e-78
whv_1618019_n06r 2012 3' Shoot grown under cold condition for 16days 637bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.08628e-84
whv_1613052_n15f 2012 5' Shoot grown under cold condition for 16days 755bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.38904e-97
whv_1613052_n15r 2012 3' Shoot grown under cold condition for 16days 648bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.53958e-80
whv_1617034_o12f 2012 5' Shoot grown under cold condition for 16days 581bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 8.45195e-81
whv_1617034_o12r 2012 3' Shoot grown under cold condition for 16days 682bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.47327e-94
whv_1610002_p04f 2012 5' Shoot grown under cold condition for 16days 766bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_1610002_p04r 2012 3' Shoot grown under cold condition for 16days 707bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.24043e-89
whv_1612017_p05f 2012 5' Shoot grown under cold condition for 16days 752bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_1612017_p05r 2012 3' Shoot grown under cold condition for 16days 661bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.1563e-90
whv_166033_p10f 2012 5' Shoot grown under cold condition for 16days 754bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1619065_p17f 2012 5' Shoot grown under cold condition for 16days 658bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.77664e-98
whv_1619065_p17r 2012 3' Shoot grown under cold condition for 16days 645bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.00409e-90
whv_1613081_p21f 2012 5' Shoot grown under cold condition for 16days 723bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1613081_p21r 2012 3' Shoot grown under cold condition for 16days 622bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 282 7.10387e-74
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