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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 499
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_22002_b19f 2012 5' Crown of seedling 431bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 279 2.56431e-73
whdl_26031_o02f 2012 5' Crown of seedling 460bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 296 2.61721e-78
whdl_26031_o02r 2012 3' Crown of seedling 561bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 279 4.49115e-73
whe_6003_e13f 2012 5' Seed DPA10 554bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 364 7.82702e-99
whe_6003_e13r 2012 3' Seed DPA10 543bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 230 2.18126e-58
whf_11002_a19f 2012 5' Spike at flowering date 312bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 185 3.81577e-45
whf_9083_b06f 2012 5' Spike at flowering date 467bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 307 8.88798e-82
whf_22028_h08f 2012 5' Spike at flowering date 444bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 249 2.88355e-64
whf_26015_o13r 2012 3' Spike at flowering date 347bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 145 7.65243e-33
whh_17081_n11r 2012 3' Spike at heading date 228bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 146 2.62142e-33
whhg_13085_k21r 2012 3' Anther at meiosis of MT4B CS wheat 86bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 64 1.69438e-08
whhg_16049_o14f 2012 5' Anther at meiosis of MT4B CS wheat 665bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 439 3.12123e-121
whhg_16049_o14r 2012 3' Anther at meiosis of MT4B CS wheat 595bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 336 2.14085e-90
whhg_16082_o23r 2012 3' Anther at meiosis of MT4B CS wheat 568bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 252 3.55745e-65
whkp_3092_f24f 2012 5' Shoot grown under continuous light 702bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 465 4.56514e-129
whkp_3092_f24r 2012 3' Shoot grown under continuous light 622bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 353 1.92116e-95
whkp_12026_h08f 2012 5' Shoot grown under continuous light 773bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 494 1.11497e-137
whkp_12026_h08r 2012 3' Shoot grown under continuous light 620bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 336 2.39698e-90
whkp_1007_i02f 2012 5' Shoot grown under continuous light 709bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 454 1.40287e-125
whkp_1007_i02r 2012 3' Shoot grown under continuous light 647bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 370 1.65636e-100
whkv_5016_b03f 2012 5' Shoot grown with continuous light after cold treatment 768bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 499 5.81271e-139
whkv_5016_b03r 2012 3' Shoot grown with continuous light after cold treatment 644bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 369 4.75902e-100
whkv_15057_h13f 2012 5' Shoot grown with continuous light after cold treatment 570bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 387 1.23016e-105
whkv_15057_h13r 2012 3' Shoot grown with continuous light after cold treatment 662bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 318 7.93647e-85
whkv_4084_m24f 2012 5' Shoot grown with continuous light after cold treatment 320bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 179 2.80194e-43
whms_20052_n15f 2012 5' Seed DPA5 of DT3DL CS wheat 558bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 351 7.12053e-95
whms_20052_n15r 2012 3' Seed DPA5 of DT3DL CS wheat 121bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 78 1.14455e-12
whms_2066_o19f 2012 5' Seed DPA5 of DT3DL CS wheat 565bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 372 4.04249e-101
whms_2066_o19r 2012 3' Seed DPA5 of DT3DL CS wheat 575bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 321 1.10168e-85
whok_8030_c07r 2012 3' Seed DPA5 160bp Contig7359       unknown[Zeamays] 53 3.01154e-05
whok_11026_g07f 2012 5' Seed DPA5 704bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 445 8.42493e-123
whok_11026_g07r 2012 3' Seed DPA5 673bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 353 2.26767e-95
whpc_3064_a15f 2012 5' Anther at meiosis 480bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 207 1.22961e-51
whpc_3064_a15r 2012 3' Anther at meiosis 426bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 217 1.5762e-54
whpc_5095_b22f 2012 5' Anther at meiosis 680bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 452 6.32941e-125
whpc_5095_b22r 2012 3' Anther at meiosis 650bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 375 6.80878e-102
whpc_9073_g17f 2012 5' Anther at meiosis 757bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 510 1.90681e-142
whpc_9073_g17r 2012 3' Anther at meiosis 687bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 391 1.35536e-106
whpc_1055_i14f 2012 5' Anther at meiosis 708bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 484 1.2659e-134
whpc_1055_i14r 2012 3' Anther at meiosis 688bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 403 2.66771e-110
whpc_8002_p04f 2012 5' Anther at meiosis 238bp Contig7359            
whpc_8002_p04r 2012 3' Anther at meiosis 192bp Contig7359            
whpc_8050_p15f 2012 5' Anther at meiosis 238bp Contig7359            
whpc_8050_p15r 2012 3' Anther at meiosis 195bp Contig7359            
whsd_18025_g05r 2012 3' Shoot grown with dessication 66bp Contig7359            
whsd_6024_i08f 2012 5' Shoot grown with dessication 615bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 345 5.08847e-93
whsd_6024_i08r 2012 3' Shoot grown with dessication 707bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 352 7.50797e-95
whsh_2001_a07f 2012 5' - 187bp Contig7359            
whsh_2001_a07r 2012 3' - 139bp Contig7359            
whsh_17090_d06r 2012 3' - 86bp Contig7359            
whsh_11090_d12r 2012 3' - 123bp Contig7359            
whsh_7069_i17r 2012 3' - 136bp Contig7359       unknown[Zeamays] 44 0.0179824
whsh_7069_i23f 2012 5' - 218bp Contig7359       unknown[Zeamays] 36 3.72626
whsh_7069_i23r 2012 3' - 163bp Contig7359       unknown[Zeamays] 44 0.0182127
whsh_7055_m10f 2012 5' - 197bp Contig7359            
whsh_7055_m10r 2012 3' - 164bp Contig7359            
whsh_2039_m21f 2012 5' - 210bp Contig7359            
whsh_2039_m21r 2012 3' - 204bp Contig7359       unknown[Zeamays] 40 0.200889
whsh_2031_o20f 2012 5' - 208bp Contig7359            
whsh_2031_o20r 2012 3' - 194bp Contig7359       unknown[Zeamays] 36 3.82601
whsp_7075_e18f 2012 5' 547bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 368 3.91081e-100
whsp_7075_e18r 2012 3' 682bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 353 2.37193e-95
whv_164079_a17f 2012 5' Shoot grown under cold condition for 16days 742bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 469 3.56783e-130
whv_168079_a17f 2012 5' Shoot grown under cold condition for 16days 517bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 223 2.29628e-56
whv_164079_a17r 2012 3' Shoot grown under cold condition for 16days 653bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 373 2.61928e-101
whv_168079_a17r 2012 3' Shoot grown under cold condition for 16days 470bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 227 1.51989e-57
whv_1619032_b07f 2012 5' Shoot grown under cold condition for 16days 694bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 460 1.42314e-127
whv_1619032_b07r 2012 3' Shoot grown under cold condition for 16days 512bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 291 6.53901e-77
whv_169013_c02f 2012 5' Shoot grown under cold condition for 16days 44bp Contig7359            
whv_1613014_c04f 2012 5' Shoot grown under cold condition for 16days 724bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 464 1.40359e-128
whv_1613014_c04r 2012 3' Shoot grown under cold condition for 16days 545bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 237 1.3598e-60
whv_163059_e14f 2012 5' Shoot grown under cold condition for 16days 699bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 464 1.32825e-128
whv_163059_e14r 2012 3' Shoot grown under cold condition for 16days 651bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 375 6.80878e-102
whv_163011_f01f 2012 5' Shoot grown under cold condition for 16days 268bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 187 1.0184e-45
whv_161027_f06f 2012 5' Shoot grown under cold condition for 16days 585bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 403 1.80427e-110
whv_161027_f06r 2012 3' Shoot grown under cold condition for 16days 460bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 242 3.43408e-62
whv_166073_g17f 2012 5' Shoot grown under cold condition for 16days 713bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 452 6.99868e-125
whv_166073_g17r 2012 3' Shoot grown under cold condition for 16days 662bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 338 9.6792e-91
whv_162040_i11f 2012 5' Shoot grown under cold condition for 16days 680bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 452 6.32941e-125
whv_168003_n01f 2012 5' Shoot grown under cold condition for 16days 680bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 460 1.77958e-127
whv_168003_n01r 2012 3' Shoot grown under cold condition for 16days 642bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 366 2.33198e-99
whv_164003_n02f 2012 5' Shoot grown under cold condition for 16days 680bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 452 6.32941e-125
whv_164003_n02r 2012 3' Shoot grown under cold condition for 16days 656bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 336 2.74995e-90
whv_1618052_n15f 2012 5' Shoot grown under cold condition for 16days 626bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 410 2.28983e-112
whv_1618052_n15r 2012 3' Shoot grown under cold condition for 16days 457bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 239 2.24553e-61
whv_1614050_o15f 2012 5' Shoot grown under cold condition for 16days 685bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 454 1.2895e-125
whv_1614050_o15r 2012 3' Shoot grown under cold condition for 16days 456bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 237 1.11444e-60
whv_1610082_o24f 2012 5' Shoot grown under cold condition for 16days 703bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 451 8.90942e-125
whv_1611082_o24f 2012 5' Shoot grown under cold condition for 16days 650bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 448 6.32864e-124
whv_1610082_o24r 2012 3' Shoot grown under cold condition for 16days 644bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 369 4.75902e-100
whv_1612034_p12f 2012 5' Shoot grown under cold condition for 16days 569bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 390 1.09312e-106
whv_1612034_p12r 2012 3' Shoot grown under cold condition for 16days 455bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 239 2.24553e-61
whv3_11046_d12f 2012 5' Shoot grown under cold condition for 3days 525bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 208 4.56661e-52
whv3_11046_d12r 2012 3' Shoot grown under cold condition for 3days 497bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 221 6.32051e-56
whv3_13077_d17f 2012 5' Shoot grown under cold condition for 3days 636bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 405 5.76476e-111
whv3_13077_d17r 2012 3' Shoot grown under cold condition for 3days 511bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 277 1.28216e-72
whv3_3009_h01f 2012 5' Shoot grown under cold condition for 3days 631bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 414 1.22469e-113
whv3_3009_h01r 2012 3' Shoot grown under cold condition for 3days 164bp Contig7359       unknown[Zeamays] 49 0.000331913
whv3_12040_i11f 2012 5' Shoot grown under cold condition for 3days 674bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 447 1.99086e-123
whv3_12040_i11r 2012 3' Shoot grown under cold condition for 3days 372bp Contig7359       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 163 1.58987e-38
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