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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 26
First Previous 1-26 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_5015_b02r 2012 3' Callus 704bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 333 3.57263e-89
whcs_3026_g07r 2012 3' Callus 706bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 333 3.57263e-89
whdl_6049_a04r 2012 3' Crown of seedling 490bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.28827e-48
whoh_8032_p20r 2012 3' Pistil at heading date 107bp Contig4042            
whok_4047_a10r 2012 3' Seed DPA5 700bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 335 9.30573e-90
whok_1006_l04r 2012 3' Seed DPA5 713bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 313 2.97472e-83
whok_3004_m03r 2012 3' Seed DPA5 731bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 325 1.04726e-86
whpc_2006_k04r 2012 3' Anther at meiosis 716bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 333 3.6642e-89
whr_1030_l20r 2012 3' Root 519bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.34933e-48
whv3_7058_h15r 2012 3' Shoot grown under cold condition for 3days 620bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 282 4.10763e-74
whvs_2073_h17r 2012 3' Liquid cultured tissue 680bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 321 1.68506e-85
whxa_6093_d22r 2012 3' Root 625bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 271 9.60117e-71
whxa_7060_e16r 2012 3' Root 274bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 155 4.25841e-36
whxa_18024_i08r 2012 3' Root 540bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 219 3.7717e-55
whxa_26036_m11r 2012 3' Root 597bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 264 1.04504e-68
whxa_26036_m12r 2012 3' Root 66bp Contig4042            
whxc_1053_l13f 2012 5' Root, treated at 50 microM Al for 6h 742bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 366 4.21516e-99
whxc_1053_l13r 2012 3' Root, treated at 50 microM Al for 6h 631bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 266 5.38676e-69
whxf_28043_e09f 2012 5' Seedling, infected with leaf rust 527bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 350 1.29866e-94
whxf_28043_e09r 2012 3' Seedling, infected with leaf rust 518bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 188 6.26788e-46
whxf_28028_f08f 2012 5' Seedling, infected with leaf rust 563bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 385 3.4701e-105
whxf_28028_f08r 2012 3' Seedling, infected with leaf rust 485bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 204 8.14294e-51
whyd_21026_c20r 2012 3' Spikelet at late flowering 523bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 195 6.82389e-48
whyd_22025_c20r 2012 3' Spikelet at late flowering 320bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 61 8.51502e-08
whyd_23059_g04r 2012 3' Spikelet at late flowering 69bp Contig4042       beta-tubulin,partial[Ammopiptanthusmongolicus] 49 0.000400837
whyd_6092_h06r 2012 3' Spikelet at late flowering 520bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.34299e-48
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