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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 97
First Previous 1-97 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1610048_a11f 2012 5' Shoot grown under cold condition for 16days 694bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_1610048_a11r 2012 3' Shoot grown under cold condition for 16days 669bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.06092e-84
whv_1614080_a19f 2012 5' Shoot grown under cold condition for 16days 508bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.60462e-49
whv_1614080_a19r 2012 3' Shoot grown under cold condition for 16days 503bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 222 2.81098e-56
whv_168095_a21f 2012 5' Shoot grown under cold condition for 16days 686bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whv_168095_a21r 2012 3' Shoot grown under cold condition for 16days 670bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_1614096_a24f 2012 5' Shoot grown under cold condition for 16days 673bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 280 2.46776e-73
whv_1614096_a24r 2012 3' Shoot grown under cold condition for 16days 651bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 291 9.9005e-77
whv_167016_b04f 2012 5' Shoot grown under cold condition for 16days 656bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.74358e-98
whv_167016_b04r 2012 3' Shoot grown under cold condition for 16days 691bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.37314e-90
whv_1618095_b22r 2012 3' Shoot grown under cold condition for 16days 41bp Contig6300            
whv_1611014_c04f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1611014_c04r 2012 3' Shoot grown under cold condition for 16days 672bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_164045_c10f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.19756e-88
whv_164045_c10r 2012 3' Shoot grown under cold condition for 16days 668bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv_1612077_c18f 2012 5' Shoot grown under cold condition for 16days 721bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.37192e-98
whv_1612077_c18r 2012 3' Shoot grown under cold condition for 16days 631bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.97837e-87
whv_1612078_c19f 2012 5' Shoot grown under cold condition for 16days 740bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_1616078_c20f 2012 5' Shoot grown under cold condition for 16days 675bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.13029e-97
whv_162078_c20f 2012 5' Shoot grown under cold condition for 16days 736bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv_1616078_c20r 2012 3' Shoot grown under cold condition for 16days 669bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 332 7.09979e-89
whv_162078_c20r 2012 3' Shoot grown under cold condition for 16days 671bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.39743e-97
whv_164093_c21f 2012 5' Shoot grown under cold condition for 16days 380bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 267 1.32293e-69
whv_164093_c21r 2012 3' Shoot grown under cold condition for 16days 305bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 120 1.51861e-25
whv_164029_d05f 2012 5' Shoot grown under cold condition for 16days 697bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_164029_d05r 2012 3' Shoot grown under cold condition for 16days 685bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.52243e-94
whv_163029_d06f 2012 5' Shoot grown under cold condition for 16days 757bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_163029_d06r 2012 3' Shoot grown under cold condition for 16days 687bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.52243e-94
whv_1614094_d24f 2012 5' Shoot grown under cold condition for 16days 762bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv_1614094_d24r 2012 3' Shoot grown under cold condition for 16days 665bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.08275e-89
whv_1615060_f15r 2012 3' Shoot grown under cold condition for 16days 615bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 8.57724e-85
whv_167025_g05f 2012 5' Shoot grown under cold condition for 16days 690bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_167025_g05r 2012 3' Shoot grown under cold condition for 16days 656bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whv_1615042_g11f 2012 5' Shoot grown under cold condition for 16days 110bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 6.77103e-13
whv_1611090_g23f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1611090_g23r 2012 3' Shoot grown under cold condition for 16days 660bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.32669e-91
whv_1620041_h10f 2012 5' Shoot grown under cold condition for 16days 401bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 280 1.51736e-73
whv_1610007_i01r 2012 3' Shoot grown under cold condition for 16days 47bp Contig6300            
whv_1610023_i05f 2012 5' Shoot grown under cold condition for 16days 639bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whv_169023_i05f 2012 5' Shoot grown under cold condition for 16days 755bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1610023_i05r 2012 3' Shoot grown under cold condition for 16days 605bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.22535e-98
whv_169023_i05r 2012 3' Shoot grown under cold condition for 16days 696bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.67842e-91
whv_1610023_i06r 2012 3' Shoot grown under cold condition for 16days 591bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.96517e-97
whv_1612024_i08f 2012 5' Shoot grown under cold condition for 16days 756bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1612024_i08r 2012 3' Shoot grown under cold condition for 16days 655bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv_166088_i24f 2012 5' Shoot grown under cold condition for 16days 757bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_166088_i24r 2012 3' Shoot grown under cold condition for 16days 663bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.9297e-92
whv_1617023_j05f 2012 5' Shoot grown under cold condition for 16days 508bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.60462e-49
whv_1617023_j05r 2012 3' Shoot grown under cold condition for 16days 494bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 231 8.01372e-59
whv_166023_j06f 2012 5' Shoot grown under cold condition for 16days 605bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.22535e-98
whv_166023_j06r 2012 3' Shoot grown under cold condition for 16days 557bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 1.96494e-97
whv_163072_j19f 2012 5' Shoot grown under cold condition for 16days 748bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.66656e-98
whv_163072_j19r 2012 3' Shoot grown under cold condition for 16days 712bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_1617088_j23f 2012 5' Shoot grown under cold condition for 16days 591bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.17867e-97
whv_1617088_j23r 2012 3' Shoot grown under cold condition for 16days 674bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_1617088_j24f 2012 5' Shoot grown under cold condition for 16days 345bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 2.80124e-59
whv_1617088_j24r 2012 3' Shoot grown under cold condition for 16days 226bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 1.6475e-35
whv_162021_k06f 2012 5' Shoot grown under cold condition for 16days 682bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.27339e-97
whv_169021_k06f 2012 5' Shoot grown under cold condition for 16days 775bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.87679e-98
whv_162021_k06r 2012 3' Shoot grown under cold condition for 16days 639bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 9.67194e-98
whv_169021_k06r 2012 3' Shoot grown under cold condition for 16days 700bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_167022_k08f 2012 5' Shoot grown under cold condition for 16days 752bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_167022_k08r 2012 3' Shoot grown under cold condition for 16days 661bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.9297e-92
whv_167069_k17f 2012 5' Shoot grown under cold condition for 16days 680bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.27339e-97
whv_167069_k17r 2012 3' Shoot grown under cold condition for 16days 704bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.76897e-96
whv_164006_l04f 2012 5' Shoot grown under cold condition for 16days 769bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_164006_l04r 2012 3' Shoot grown under cold condition for 16days 673bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_1620054_l16f 2012 5' Shoot grown under cold condition for 16days 754bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 9.19232e-97
whv_1620054_l16r 2012 3' Shoot grown under cold condition for 16days 672bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.53855e-91
whv_1614035_m09f 2012 5' Shoot grown under cold condition for 16days 759bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_1614035_m09r 2012 3' Shoot grown under cold condition for 16days 655bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv_168036_m12f 2012 5' Shoot grown under cold condition for 16days 757bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_168036_m12r 2012 3' Shoot grown under cold condition for 16days 744bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.7872e-97
whv_163067_m18r 2012 3' Shoot grown under cold condition for 16days 691bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.32488e-92
whv_168084_m23f 2012 5' Shoot grown under cold condition for 16days 661bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.80969e-98
whv_168084_m24f 2012 5' Shoot grown under cold condition for 16days 444bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 278 5.7967e-73
whv_168084_m24r 2012 3' Shoot grown under cold condition for 16days 539bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 230 2.13674e-58
whv_1614052_n16f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1614052_n16r 2012 3' Shoot grown under cold condition for 16days 652bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.08956e-91
whv_1612084_n24f 2012 5' Shoot grown under cold condition for 16days 235bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 168 8.35641e-40
whv_1620002_o03f 2012 5' Shoot grown under cold condition for 16days 256bp Contig6300       mCG1051063[Musmusculus] 41 0.11954
whv_1620002_o03r 2012 3' Shoot grown under cold condition for 16days 244bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 6.00329e-06
whv_1618034_o11f 2012 5' Shoot grown under cold condition for 16days 630bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.7542e-97
whv_1618034_o11r 2012 3' Shoot grown under cold condition for 16days 642bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 9.8203e-90
whv_1618034_o12f 2012 5' Shoot grown under cold condition for 16days 145bp Contig6300       hypotheticalproteinSCHCODRAFT_258494[SchizophyllumcommuneH4-8] 35 8.30154
whv_162049_o13f 2012 5' Shoot grown under cold condition for 16days 702bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv_162049_o13r 2012 3' Shoot grown under cold condition for 16days 631bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.97837e-87
whv_1620050_o16f 2012 5' Shoot grown under cold condition for 16days 683bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whv_1620050_o16r 2012 3' Shoot grown under cold condition for 16days 650bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 312 5.42e-83
whv_1619066_o19f 2012 5' Shoot grown under cold condition for 16days 697bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_1619066_o19r 2012 3' Shoot grown under cold condition for 16days 334bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 120 1.52164e-25
whv_165082_o23f 2012 5' Shoot grown under cold condition for 16days 669bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.8758e-98
whv_165082_o23r 2012 3' Shoot grown under cold condition for 16days 684bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.2974e-90
whv_167082_o24f 2012 5' Shoot grown under cold condition for 16days 653bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.67807e-80
whv_167082_o24r 2012 3' Shoot grown under cold condition for 16days 660bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.35602e-89
whv_165034_p12f 2012 5' Shoot grown under cold condition for 16days 688bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv_165034_p12r 2012 3' Shoot grown under cold condition for 16days 631bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.47914e-98
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