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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 78
First Previous 1-78 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_5012_e04f 2012 5' Callus 675bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.21138e-106
whcs_5012_e04r 2012 3' Callus 773bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 289 9.29184e-76
whei_8075_e17f 2012 5' Dormant seed with water absorption after breaking 528bp Contig9674       F1-ATPase,partial[Triticumaestivum] 328 7.05895e-88
whei_8075_e17r 2012 3' Dormant seed with water absorption after breaking 567bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 190 1.66018e-46
whem_1031_b06r 2012 3' Dormant seed with water absorption 554bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 232 4.64215e-59
whf_26085_i12f 2012 5' Spike at flowering date 512bp Contig9674       F1-ATPase,partial[Triticumaestivum] 307 6.75114e-82
whf_26085_i12r 2012 3' Spike at flowering date 213bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 131 6.56035e-29
whh_5058_d16f 2012 5' Spike at heading date 494bp Contig9674       F1-ATPase,partial[Triticumaestivum] 309 3.0241e-82
whh_5058_d16r 2012 3' Spike at heading date 217bp Contig9674            
whh_5027_g20r 2012 3' Spike at heading date 42bp Contig9674            
whh_5012_h07r 2012 3' Spike at heading date 50bp Contig9674            
whh_5069_i23f 2012 5' Spike at heading date 499bp Contig9674       F1-ATPase,partial[Triticumaestivum] 315 3.20131e-84
whh_5069_i23r 2012 3' Spike at heading date 517bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 212 5.16775e-53
whh_15040_n21r 2012 3' Spike at heading date 413bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 190 1.19089e-46
whhg_12019_n05f 2012 5' Anther at meiosis of MT4B CS wheat 630bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 6.78382e-96
whhg_12019_n05r 2012 3' Anther at meiosis of MT4B CS wheat 764bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 292 1.06994e-76
whkp_2029_c05f 2012 5' Shoot grown under continuous light 414bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 243 1.54815e-62
whkp_2029_c05r 2012 3' Shoot grown under continuous light 724bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 277 3.20892e-72
whkv_20073_h18f 2012 5' Shoot grown with continuous light after cold treatment 654bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 380 2.79846e-103
whkv_20073_h18r 2012 3' Shoot grown with continuous light after cold treatment 723bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 271 1.74386e-70
whms_7032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 538bp Contig9674       F1-ATPase,partial[Triticumaestivum] 338 7.27606e-91
whms_7032_a08r 2012 3' Seed DPA5 of DT3DL CS wheat 621bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 269 6.2233e-70
whms_1010_g03r 2012 3' Seed DPA5 of DT3DL CS wheat 633bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 267 1.8514e-69
whms_4052_m15f 2012 5' Seed DPA5 of DT3DL CS wheat 584bp Contig9674       F1-ATPase,partial[Triticumaestivum] 342 3.71866e-92
whms_4052_m15r 2012 3' Seed DPA5 of DT3DL CS wheat 591bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 212 4.66251e-53
whpc_4092_e24f 2012 5' Anther at meiosis 724bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 323 2.96081e-86
whpc_4092_e24r 2012 3' Anther at meiosis 667bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 294 2.14265e-77
whrd_3091_f21f 2012 5' Root of dessiccated seed 478bp Contig9674       F1-ATPase,partial[Triticumaestivum] 302 2.15042e-80
whrd_3091_f21r 2012 3' Root of dessiccated seed 589bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 210 1.74407e-52
whrd_12026_g07f 2012 5' Root of dessiccated seed 555bp Contig9674       F1-ATPase,partial[Triticumaestivum] 346 1.68889e-93
whrd_12026_g07r 2012 3' Root of dessiccated seed 568bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 194 1.50157e-47
whrd_8082_o23f 2012 5' Root of dessiccated seed 514bp Contig9674       F1-ATPase,partial[Triticumaestivum] 319 1.71681e-85
whrd_8082_o23r 2012 3' Root of dessiccated seed 613bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 227 2.60057e-57
whsc_6082_o23f 2012 5' Shoot grown with cold treatment 532bp Contig9674       F1-ATPase,partial[Triticumaestivum] 338 5.33896e-91
whsc_6082_o23r 2012 3' Shoot grown with cold treatment 515bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 275 4.97066e-72
whva_8022_j14f 2012 5' Shoot with ABA treatment 446bp Contig9674       F1-ATPase,partial[Triticumaestivum] 281 6.81803e-74
whva_8022_j14r 2012 3' Shoot with ABA treatment 547bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 158 6.1465e-37
whvd_17028_e07f 2012 5' Shoot grown with dessication 657bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 7.45418e-104
whvd_17028_e07r 2012 3' Shoot grown with dessication 666bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 293 2.76622e-77
whvh_10085_l21f 2012 5' Shoot with heat shock treatment 676bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 392 5.81943e-107
whvh_10085_l21r 2012 3' Shoot with heat shock treatment 705bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 320 2.39639e-85
whvs_8008_i04f 2012 5' Liquid cultured tissue 671bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.18625e-106
whvs_8008_i04r 2012 3' Liquid cultured tissue 717bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 326 3.46354e-87
whxa_12031_b06f 2012 5' Root 310bp Contig9674       F1-ATPase,partial[Triticumaestivum] 198 5.68871e-49
whxa_18060_e16f 2012 5' Root 620bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 1.89484e-95
whxa_18060_e16r 2012 3' Root 632bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 277 2.3366e-72
whxb_33061_d13f 2012 5' Root 633bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.52295e-98
whxb_33061_d13r 2012 3' Root 557bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 194 1.4279e-47
whxb_5044_e11f 2012 5' Root 631bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 301 1.51103e-79
whxb_5044_e11r 2012 3' Root 460bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 185 4.98185e-45
whxc_35091_e21f 2012 5' Root, treated at 50 microM Al for 6h 602bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 175 1.10575e-41
whxc_35091_e21r 2012 3' Root, treated at 50 microM Al for 6h 557bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 192 5.42602e-47
whxc_36043_f10f 2012 5' Root, treated at 50 microM Al for 6h 338bp Contig9674            
whxc_36043_f10r 2012 3' Root, treated at 50 microM Al for 6h 309bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0137298
whxc_9019_m05f 2012 5' Root, treated at 50 microM Al for 6h 512bp Contig9674       F1-ATPase,partial[Triticumaestivum] 317 8.52043e-85
whxc_9019_m05r 2012 3' Root, treated at 50 microM Al for 6h 503bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 236 2.45684e-60
whxd_4087_j22f 2012 5' Root, treated at 50 microM Al for 6h 598bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 171 1.20403e-40
whxd_4087_j22r 2012 3' Root, treated at 50 microM Al for 6h 554bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 185 4.98277e-45
whxd_25086_k24r 2012 3' Root, treated at 50 microM Al for 6h 88bp Contig9674            
whxd_26086_k24r 2012 3' Root, treated at 50 microM Al for 6h 88bp Contig9674            
whxd_19020_n08f 2012 5' Root, treated at 50 microM Al for 6h 516bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.85084e-26
whxd_19020_n08r 2012 3' Root, treated at 50 microM Al for 6h 496bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 141 8.3508e-32
whxg_36092_e24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 265bp Contig9674       F1-ATPase,partial[Triticumaestivum] 169 3.76153e-40
whxg_36092_e24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 409bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.37139e-34
whxh_24096_b24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 628bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 302 5.21834e-80
whxh_24096_b24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 738bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 331 1.96256e-88
whxh_22061_c13f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 619bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 8.38741e-96
whxh_22061_c13r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 752bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 324 2.48711e-86
HX015111 whxj_20024_i07f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 363bp Contig9674       F1-ATPase,partial[Triticumaestivum] 232 4.65046e-59
HX015127 whxj_20024_i07r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 278bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 72 4.72428e-11
HX084801 whxp_15015_a02r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 67bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 48 0.000854148
HX170583 whxt_4009_g02f 2012 5' Roots, 18 day old plants were grown hydroponically 721bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 3.39384e-42
HX193571 whxu_4008_j03r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 300bp Contig9674            
HX199809 whxu_20033_o09r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 301bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 6.41854e-16
whxy_9073_h17f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 675bp Contig9674       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.21138e-106
whxy_9073_h17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 702bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 274 2.57222e-71
whyd_22091_d24f 2012 5' Spikelet at late flowering 467bp Contig9674       F1-ATPase,partial[Triticumaestivum] 290 1.12433e-76
whyd_3028_g02r 2012 3' Spikelet at late flowering 506bp Contig9674       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 168 6.45264e-40
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