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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 50
First Previous 1-50 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whr_11033_a03f 2012 5' Root 572bp Contig11598       RRNAintron-encodedhomingendonuclease[Medicagotruncatula] 145 6.23401e-33
whr_19081_a06f 2012 5' Root 498bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.26878e-28
whr_6082_a12f 2012 5' Root 525bp Contig11598       Tar1p[Medicagotruncatula] 104 1.57208e-41
whr_17049_a22f 2012 5' Root 500bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.25371e-28
whr_19034_b03f 2012 5' Root 433bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.11812e-27
whr_22003_b07f 2012 5' Root 598bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 5.24698e-28
whr_17050_b10f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_24089_c06f 2012 5' Root 494bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28385e-28
whr_7009_c13r 2012 3' Root 442bp Contig11598       PREDICTED:uncharacterizedproteinLOC100806341[Glycinemax] 158 5.12549e-37
whr_20089_c18f 2012 5' Root 512bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.29075e-28
whr_16027_d02f 2012 5' Root 460bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.1028e-27
whr_13075_d05f 2012 5' Root 509bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.30621e-28
whr_6091_d18f 2012 5' Root 392bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.24394e-28
whr_13090_d24r 2012 3' Root 479bp Contig11598       Tar1p[Medicagotruncatula] 104 1.42329e-41
whr_4004_e19f 2012 5' Root 454bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.27276e-28
whr_1084_e24f 2012 5' Root 518bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.45529e-28
whr_12052_f04f 2012 5' Root 406bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28524e-28
whr_20068_f05f 2012 5' Root 419bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.33736e-28
whr_17011_g01f 2012 5' Root 477bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.2584e-28
whr_19027_g02f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_20028_g02r 2012 3' Root 184bp Contig11598       unknown[Zeamays] 77 1.4582e-12
whr_14059_g22f 2012 5' Root 553bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 4.15629e-28
whr_20075_g23f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_18013_h13f 2012 5' Root 511bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.30621e-28
whr_5077_h17f 2012 5' Root 517bp Contig11598       ATPsynthasesubunitbeta[Medicagotruncatula] 132 5.33075e-29
whr_10054_i16f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_10055_j04f 2012 5' Root 451bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.13061e-27
whr_4055_j04f 2012 5' Root 454bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.27276e-28
whr_22087_j12f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_23061_k04f 2012 5' Root 78bp Contig11598       ATPsynthasesubunitbeta[Medicagotruncatula] 53 2.31024e-05
whr_11013_k07f 2012 5' Root 456bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.27276e-28
whr_18046_k15f 2012 5' Root 499bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.25371e-28
whr_22046_k15f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_22078_k17f 2012 5' Root 513bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.29075e-28
whr_13031_l02f 2012 5' Root 391bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.24394e-28
whr_24046_l03f 2012 5' Root 472bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_24094_l06f 2012 5' Root 472bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.30246e-28
whr_23030_l20f 2012 5' Root 221bp Contig11598       hypotheticalproteinMELLADRAFT_92514[Melampsoralarici-populina98AG31] 110 2.10301e-22
whr_17023_m08f 2012 5' Root 532bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.76659e-28
whr_13081_n05f 2012 5' Root 512bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.133e-27
whr_25049_n09r 2012 3' Root 371bp Contig11598       CytochromeP450likeTBP[Medicagotruncatula] 125 6.29128e-27
whr_2049_n15f 2012 5' Root 432bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.11812e-27
whr_17056_n22f 2012 5' Root 609bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.25905e-33
whr_23088_n24f 2012 5' Root 492bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28385e-28
whr_1032_o14f 2012 5' Root 513bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.29075e-28
whr_22096_o24f 2012 5' Root 466bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 121 9.03346e-26
whr_19032_p02f 2012 5' Root 493bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28385e-28
whr_3032_p08f 2012 5' Root 473bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.28777e-28
whr_17048_p15f 2012 5' Root 503bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 129 3.23863e-28
whr_4057_p15f 2012 5' Root 411bp Contig11598       PREDICTED:uncharacterizedproteinLOC100810244[Glycinemax] 126 2.12066e-27
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