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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 302
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_14035_m09f 2012 5' Seed DPA20 600bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.77306e-93
whdp_14035_m09r 2012 3' Seed DPA20 547bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 220 1.31708e-55
whe_12041_c21f 2012 5' Seed DPA10 573bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.08018e-93
whe_12042_c21r 2012 3' Seed DPA10 482bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 177 1.77165e-42
whf_28004_f07f 2012 5' Spike at flowering date 296bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 209 3.28226e-52
whf_28005_f07r 2012 3' Spike at flowering date 456bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 174 8.83256e-42
whf_8068_f17f 2012 5' Spike at flowering date 587bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.48285e-96
whf_8068_f17r 2012 3' Spike at flowering date 448bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 173 2.60372e-41
whf_10085_i06f 2012 5' Spike at flowering date 488bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 7.49958e-89
whf_10085_i06r 2012 3' Spike at flowering date 525bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 204 8.61225e-51
whf_21055_m04r 2012 3' Spike at flowering date 466bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 163 1.5942e-38
whkp_3095_a21r 2012 3' Shoot grown under continuous light 140bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 97 1.78439e-18
whkp_5028_e08f 2012 5' Shoot grown under continuous light 767bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.7316e-96
whkp_5028_e08r 2012 3' Shoot grown under continuous light 689bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.42442e-87
whkp_10055_j13f 2012 5' Shoot grown under continuous light 385bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 82 4.60285e-14
whkp_10055_j13r 2012 3' Shoot grown under continuous light 373bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 102 4.34977e-20
whkp_13005_k01f 2012 5' Shoot grown under continuous light 511bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 2.48494e-92
whkp_13005_k01r 2012 3' Shoot grown under continuous light 648bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 2.78363e-79
whkp_2001_o01f 2012 5' Shoot grown under continuous light 666bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.06094e-96
whkp_2001_o01r 2012 3' Shoot grown under continuous light 696bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 2.96269e-88
whkp_16033_o10f 2012 5' Shoot grown under continuous light 445bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 260 9.57699e-68
whkp_5049_p14f 2012 5' Shoot grown under continuous light 675bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.0746e-96
whkp_5049_p14r 2012 3' Shoot grown under continuous light 642bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 295 8.62297e-78
whkv_12048_a12f 2012 5' Shoot grown with continuous light after cold treatment 789bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 1.10011e-95
whkv_12048_a12r 2012 3' Shoot grown with continuous light after cold treatment 745bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 7.7703e-93
whkv_20032_b07r 2012 3' Shoot grown with continuous light after cold treatment 346bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0183838
whkv_11028_e07f 2012 5' Shoot grown with continuous light after cold treatment 763bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.70826e-96
whkv_11028_e07r 2012 3' Shoot grown with continuous light after cold treatment 669bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 4.43591e-83
whkv_15044_e11f 2012 5' Shoot grown with continuous light after cold treatment 40bp Contig5811       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 35 4.42159
whkv_16044_f12r 2012 3' Shoot grown with continuous light after cold treatment 503bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 235 5.47326e-60
whkv_10009_g01r 2012 3' Shoot grown with continuous light after cold treatment 296bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 190 2.06065e-46
whkv_8041_g10f 2012 5' Shoot grown with continuous light after cold treatment 754bp Contig5811       thioredoxinF-type,chloroplastprecursor,putative,expressed[Triticumaestivum] 364 1.67523e-98
whkv_19087_i22f 2012 5' Shoot grown with continuous light after cold treatment 743bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.58071e-96
whkv_12006_l03f 2012 5' Shoot grown with continuous light after cold treatment 673bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.0746e-96
whkv_12006_l03r 2012 3' Shoot grown with continuous light after cold treatment 715bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.52423e-87
whkv_8049_o13f 2012 5' Shoot grown with continuous light after cold treatment 120bp Contig5811            
whkv_8049_o13r 2012 3' Shoot grown with continuous light after cold treatment 93bp Contig5811       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 68 1.16649e-09
whok_14015_a01f 2012 5' Seed DPA5 665bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.03725e-96
whok_14015_a01r 2012 3' Seed DPA5 703bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.501e-87
whsd_15016_b04f 2012 5' Shoot grown with dessication 613bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 6.24112e-96
whsd_15016_b04r 2012 3' Shoot grown with dessication 639bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 290 2.73835e-76
whsd_9054_l15f 2012 5' Shoot grown with dessication 555bp Contig5811       thioredoxinF-type,chloroplastprecursor,putative,expressed[Triticumaestivum] 328 6.33566e-88
whsd_3033_o10f 2012 5' Shoot grown with dessication 611bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 6.24112e-96
whsd_3033_o10r 2012 3' Shoot grown with dessication 748bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.44183e-94
whsd_3081_o21r 2012 3' Shoot grown with dessication 333bp Contig5811       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Aegilopslongissima] 228 5.18151e-58
whsh_2033_a15f 2012 5' - 221bp Contig5811            
whsh_2033_a15r 2012 3' - 269bp Contig5811            
whsh_18033_a21f 2012 5' - 558bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 202 6.84803e-50
whsh_7090_d18f 2012 5' - 232bp Contig5811            
whsh_7090_d18r 2012 3' - 286bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.00043941
whsh_15083_e06r 2012 3' - 89bp Contig5811            
whsh_8084_f12r 2012 3' - 109bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 4.2411e-15
whsh_16044_h03f 2012 5' - 127bp Contig5811            
whsh_16044_h03r 2012 3' - 89bp Contig5811            
whsh_6053_i22f 2012 5' - 61bp Contig5811            
whsh_6053_i22r 2012 3' - 86bp Contig5811            
whsh_6007_m19f 2012 5' - 352bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00165
whsh_6007_m19r 2012 3' - 331bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 3.1996e-07
whsp_1093_d21f 2012 5' 494bp Contig5811       thioredoxinF-type,chloroplastprecursor,putative,expressed[Triticumaestivum] 293 1.71719e-77
whsp_5075_f17f 2012 5' 466bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 1.61977e-83
whsp_5075_f17r 2012 3' 558bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 230 1.37663e-58
whv_165011_f02f 2012 5' Shoot grown under cold condition for 16days 762bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.72148e-96
whv3_19029_d05f 2012 5' Shoot grown under cold condition for 3days 707bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.33392e-96
whv3_19029_d05r 2012 3' Shoot grown under cold condition for 3days 511bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 213 2.26312e-53
whv3_9044_f11f 2012 5' Shoot grown under cold condition for 3days 672bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 7.79388e-96
whv3_9044_f11r 2012 3' Shoot grown under cold condition for 3days 657bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.29279e-87
whv3_19044_f12f 2012 5' Shoot grown under cold condition for 3days 681bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.12175e-96
whv3_19044_f12r 2012 3' Shoot grown under cold condition for 3days 628bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 295 8.33121e-78
whv3_20041_h09f 2012 5' Shoot grown under cold condition for 3days 735bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.51033e-96
whv3_20041_h09r 2012 3' Shoot grown under cold condition for 3days 680bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 4.14084e-92
whv3_16074_h20f 2012 5' Shoot grown under cold condition for 3days 739bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.55725e-96
whv3_16074_h20r 2012 3' Shoot grown under cold condition for 3days 666bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.29689e-82
whva_16016_b03f 2012 5' Shoot with ABA treatment 748bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.62763e-96
whva_16016_b03r 2012 3' Shoot with ABA treatment 707bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.51632e-87
whva_12031_b06r 2012 3' Shoot with ABA treatment 337bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 234 1.22863e-59
whva_13014_c04r 2012 3' Shoot with ABA treatment 609bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 257 2.27962e-66
whva_14046_c12f 2012 5' Shoot with ABA treatment 658bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 1.96618e-96
whva_14046_c12r 2012 3' Shoot with ABA treatment 668bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 2.98982e-79
whva_12030_d07f 2012 5' Shoot with ABA treatment 468bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 8.03885e-83
whva_12030_d07r 2012 3' Shoot with ABA treatment 594bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 281 1.39411e-73
whva_10084_f06f 2012 5' Shoot with ABA treatment 534bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 1.03955e-94
whva_10084_f06r 2012 3' Shoot with ABA treatment 658bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 290 2.26006e-76
whva_9011_g01f 2012 5' Shoot with ABA treatment 357bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 254 1.15625e-65
whva_19054_l16f 2012 5' Shoot with ABA treatment 591bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 6.56625e-84
whva_19054_l16r 2012 3' Shoot with ABA treatment 718bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 1.55471e-87
whva_8078_l17f 2012 5' Shoot with ABA treatment 597bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.93184e-95
whva_11069_l17r 2012 3' Shoot with ABA treatment 628bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 293 3.12365e-77
whva_8078_l17r 2012 3' Shoot with ABA treatment 626bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 295 8.22013e-78
whva_8072_n11r 2012 3' Shoot with ABA treatment 555bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 222 4.80388e-56
whvd_18030_c07f 2012 5' Shoot grown with dessication 693bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.45013e-95
whvd_18030_c07r 2012 3' Shoot grown with dessication 669bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 4.43591e-83
whvd_11003_m01r 2012 3' Shoot grown with dessication 679bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 2.84235e-85
whvd_10051_m13f 2012 5' Shoot grown with dessication 711bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.3575e-96
whvd_10051_m13r 2012 3' Shoot grown with dessication 578bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 239 4.28829e-61
whvd_19068_n19f 2012 5' Shoot grown with dessication 677bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.09817e-96
whvd_19068_n19r 2012 3' Shoot grown with dessication 501bp Contig5811       putativerubiscosmallsubunit[Triticumdurum] 208 4.22001e-52
whvh_20016_a03f 2012 5' Shoot with heat shock treatment 752bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 1.00741e-95
whvh_20016_a03r 2012 3' Shoot with heat shock treatment 780bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 2.02452e-94
whvh_17031_a05f 2012 5' Shoot with heat shock treatment 773bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.7783e-96
whvh_17031_a05r 2012 3' Shoot with heat shock treatment 718bp Contig5811       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 4.67027e-92
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