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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 61
First Previous 1-61 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_7096_a23f 2012 5' Callus 737bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.19782e-99
whcs_7096_a23r 2012 3' Callus 765bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.41802e-99
whdp_19052_n15f 2012 5' Seed DPA20 540bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 330 1.54876e-88
whdp_19052_n15r 2012 3' Seed DPA20 637bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 5.69659e-82
whem_19046_c11f 2012 5' Dormant seed with water absorption 505bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 313 1.58143e-83
whem_19046_c11r 2012 3' Dormant seed with water absorption 423bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 6.18113e-75
whhg_3027_f06f 2012 5' Anther at meiosis of MT4B CS wheat 619bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.89028e-97
whhg_3027_f06r 2012 3' Anther at meiosis of MT4B CS wheat 761bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 8.45996e-98
whkp_5074_h20f 2012 5' Shoot grown under continuous light 713bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.96095e-99
whkp_5074_h20r 2012 3' Shoot grown under continuous light 785bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 8.9269e-98
whms_11024_i08f 2012 5' Seed DPA5 of DT3DL CS wheat 479bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.00806e-86
whms_11024_i08r 2012 3' Seed DPA5 of DT3DL CS wheat 478bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 6.47472e-77
whok_17040_j11f 2012 5' Seed DPA5 625bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.22303e-99
whok_17040_j11r 2012 3' Seed DPA5 563bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 3.74203e-75
whpc_15047_a09f 2012 5' Anther at meiosis 798bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.74214e-99
whpc_15047_a09r 2012 3' Anther at meiosis 772bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.50641e-99
whsl_12058_c22r 2012 3' Seed DPA30 118bp Contig18690       PREDICTED:ADP-ribosylationfactor4-likeisoform1[Strongylocentrotuspurpuratus] 80 2.3062e-13
whsl_26058_d10f 2012 5' Seed DPA30 627bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.38062e-93
whsl_26059_d10r 2012 3' Seed DPA30 62bp Contig18690            
whv_1617065_o17f 2012 5' Shoot grown under cold condition for 16days 600bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 5.78219e-91
whv_1617065_o17r 2012 3' Shoot grown under cold condition for 16days 322bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 4.16756e-55
whva_14056_i16r 2012 3' Shoot with ABA treatment 354bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 3.27109e-60
whvh_8049_o14r 2012 3' Shoot with heat shock treatment 84bp Contig18690       hypotheticalproteinOsI_02133[OryzasativaIndicaGroup] 63 2.89868e-08
whvh_4082_o24f 2012 5' Shoot with heat shock treatment 676bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.64805e-99
whvh_4082_o24r 2012 3' Shoot with heat shock treatment 584bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 9.83145e-77
whxb_38092_e23r 2012 3' Root 767bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.97815e-98
whxc_26030_d08f 2012 5' Root, treated at 50 microM Al for 6h 344bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 199 3.43223e-49
whxc_26030_d08r 2012 3' Root, treated at 50 microM Al for 6h 431bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 146 3.38816e-33
whxd_22054_k16r 2012 3' Root, treated at 50 microM Al for 6h 588bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 1.35054e-73
whxe_12007_i02f 2012 5' Seedling, infected with leaf rust 576bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 1.75072e-99
whxe_12007_i02r 2012 3' Seedling, infected with leaf rust 613bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.10678e-76
whxe_35086_k24f 2012 5' Seedling, infected with leaf rust 588bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 2.94746e-84
whxe_35086_k24r 2012 3' Seedling, infected with leaf rust 565bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 8.90666e-77
whxe_20001_p02f 2012 5' Seedling, infected with leaf rust 193bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 103 1.95136e-20
whxe_20001_p02r 2012 3' Seedling, infected with leaf rust 161bp Contig18690       EGF-likedomaincontainingprotein[Tetrahymenathermophila] 35 8.48691
whxf_17047_a10f 2012 5' Seedling, infected with leaf rust 598bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.71459e-87
whxf_17047_a10r 2012 3' Seedling, infected with leaf rust 269bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 5.58815e-44
whxg_36017_p06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 464bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 151 8.18758e-35
HX024429 whxk_7090_g24f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 367bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.95838e-49
HX024447 whxk_7090_g24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 433bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 186 2.26213e-45
HX027739 whxk_7003_m01f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 284bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 176 3.01231e-42
HX028906 whxk_10068_n20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 481bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 3.52859e-83
HX028923 whxk_10068_n20r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 378bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 151 8.13305e-35
HX042924 whxm_15044_e12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 287bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 148 9.07765e-34
HX042935 whxm_15044_e12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 765bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.41802e-99
HX090172 whxp_14094_d23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 562bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.1982e-89
HX090173 whxp_15094_d23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 643bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.69656e-89
HX090201 whxp_14094_d23r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 720bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 7.98477e-84
HX090202 whxp_15094_d23r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 672bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.39803e-76
HX097818 whxp_35039_j10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 663bp Contig18690       hypotheticalproteinSORBIDRAFT_0016s002040[Sorghumbicolor] 147 3.16465e-33
HX097846 whxp_35039_j10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 626bp Contig18690       hypotheticalproteinSORBIDRAFT_0016s002040[Sorghumbicolor] 147 2.76836e-33
HX097987 whxp_5055_j13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 588bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.27555e-95
HX098016 whxp_5055_j13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 606bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.0747e-76
HX180335 whxt_18001_o01f 2012 5' Roots, 18 day old plants were grown hydroponically 722bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 141 1.59565e-31
HX180359 whxt_18001_o01r 2012 3' Roots, 18 day old plants were grown hydroponically 788bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 1.38842e-98
whxv_3086_k23f 2012 5' Leaves, plant was grown at constant 23 500bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.36068e-42
whxv_3086_k23r 2012 3' Leaves, plant was grown at constant 23 448bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 8.35647e-48
whxv_1084_n23r 2012 3' Leaves, plant was grown at constant 23 388bp Contig18690       PREDICTED:ADP-ribosylationfactor1-like[Brachypodiumdistachyon] 156 3.24953e-36
whxy_4011_e02f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 41bp Contig18690            
whxy_9004_m04f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 721bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 3.04978e-99
whxy_9004_m04r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 657bp Contig18690       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 3.4787e-85
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