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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 36
First Previous 1-36 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_4080_a20f 2012 5' Seed DPA20 546bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 310 1.68441e-82
whdp_4080_a20r 2012 3' Seed DPA20 603bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 278 9.27433e-73
whdp_14066_o20f 2012 5' Seed DPA20 532bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 5.1712e-86
whf_20081_a06f 2012 5' Spike at flowering date 294bp Contig6432       PREDICTED:LOWQUALITYPROTEIN:ubiquitin-conjugatingenzymeE22-like[Glycinemax] 200 1.53019e-49
whr_15080_p17f 2012 5' Root 639bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 8.603e-86
whr_15080_p17r 2012 3' Root 510bp Contig6432       uncharacterizedproteinLOC100306222[Glycinemax] 214 7.81477e-54
whv_1614047_b10r 2012 3' Shoot grown under cold condition for 16days 674bp Contig6432       hypotheticalprotein,partial[Arachisdiogoi] 123 5.5915e-27
whv_1614095_b21f 2012 5' Shoot grown under cold condition for 16days 715bp Contig6432       predictedprotein[Populustrichocarpa] 139 1.00415e-30
whxb_7057_g13f 2012 5' Root 633bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 8.27211e-86
whxb_7057_g13r 2012 3' Root 306bp Contig6432       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 69 5.22445e-10
whxb_7057_g14f 2012 5' Root 573bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 319 2.41197e-85
whxb_7057_g14r 2012 3' Root 252bp Contig6432       unknown[Zeamays] 45 0.00614857
whxc_8083_n22f 2012 5' Root, treated at 50 microM Al for 6h 499bp Contig6432       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 150 1.36384e-34
whxc_8083_n22r 2012 3' Root, treated at 50 microM Al for 6h 62bp Contig6432       unknown[Lotusjaponicus] 47 0.00172986
whxf_21066_o20f 2012 5' Seedling, infected with leaf rust 516bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 319 1.75973e-85
whxg_13063_b14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 578bp Contig6432       ubiquitin-conjugatingenzymeE2-17kDa[Zeamays] 258 8.92092e-67
whxg_13063_b14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 627bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 291 1.18698e-76
whxg_22045_c10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 505bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 319 1.68962e-85
whxg_14001_o02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 590bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 7.01544e-86
whxg_14001_o02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 647bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 296 3.96993e-78
HX020291 whxk_16079_a18f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 363bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 260 1.6009e-67
HX020341 whxk_10080_a20f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 343bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 245 3.19761e-63
HX037341 whxl_4021_l06f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 314bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 225 3.31503e-57
HX037617 whxl_4069_l17f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 275bp Contig6432       ubiquitin-conjugatingenzymeE2-17kDa[Zeamays] 200 1.96896e-49
HX044251 whxm_11057_g14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 406bp Contig6432       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 137 1.57556e-30
HX077078 whxo_17042_g12f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 667bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 319 3.64634e-85
HX077089 whxo_17042_g12r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 546bp Contig6432       uncharacterizedproteinLOC100306222[Glycinemax] 240 2.09788e-61
HX175051 whxt_15071_j17f 2012 5' Roots, 18 day old plants were grown hydroponically 760bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.26711e-85
HX175074 whxt_15071_j17r 2012 3' Roots, 18 day old plants were grown hydroponically 755bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.24526e-85
HX190103 whxu_29010_g04r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 295bp Contig6432       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 126 2.14235e-27
HX190843 whxu_9074_g20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 771bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.29357e-85
HX190866 whxu_9074_g20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 743bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.20157e-85
HX194090 whxu_3055_j14f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 754bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.23434e-85
HX194114 whxu_3055_j14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 759bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.26711e-85
whxx_10041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 772bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 304 1.62261e-80
whxx_10041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 766bp Contig6432       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.27182e-85
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