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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 66
First Previous 1-66 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsh_16081_a06r 2012 3' - 65bp Contig6477            
whsh_6081_a06r 2012 3' - 120bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 35 6.49451
whsh_8065_a11r 2012 3' - 426bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 173 1.99013e-41
whsh_2017_a20f 2012 5' - 367bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 9.14576e-15
whsh_2017_a20r 2012 3' - 378bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 107 1.34682e-21
whsh_13018_b02f 2012 5' - 411bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 125 8.02518e-27
whsh_13018_b02r 2012 3' - 386bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.12396e-28
whsh_7018_b08f 2012 5' - 301bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0529437
whsh_7018_b08r 2012 3' - 268bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 37 1.70217
whsh_5084_b18f 2012 5' - 289bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0537142
whsh_5082_b18r 2012 3' - 256bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.11954
whsh_15082_b24f 2012 5' - 336bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.32603e-13
whsh_15082_b24r 2012 3' - 368bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.91438e-22
whsh_17074_d05r 2012 3' - 150bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 35 6.55972
whsh_8090_d06r 2012 3' - 235bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.117964
whsh_14058_d10r 2012 3' - 156bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.345651
whsh_8074_d11f 2012 5' - 296bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.00011439
whsh_8074_d11r 2012 3' - 271bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.69823e-08
whsh_16058_d16f 2012 5' - 379bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.71534e-13
whsh_16058_d16r 2012 3' - 358bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.69506e-13
whsh_10058_d22f 2012 5' - 177bp Contig6477       hypotheticalproteinSCHCODRAFT_258494[SchizophyllumcommuneH4-8] 35 8.3262
whsh_10058_d22r 2012 3' - 144bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 40 0.19759
whsh_6003_e01r 2012 3' - 87bp Contig6477            
whsh_14051_e04r 2012 3' - 168bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.117304
whsh_14083_e06f 2012 5' - 487bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.62156e-49
whsh_14083_e06r 2012 3' - 488bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.36903e-56
whsh_17083_e12f 2012 5' - 180bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.338039
whsh_17083_e12r 2012 3' - 156bp Contig6477       hypotheticalprotein,unlikely[TrypanosomabruceigambienseDAL972] 35 8.54048
whsh_16035_e15f 2012 5' - 561bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 322 3.54209e-86
whsh_2003_e19f 2012 5' - 332bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.66046e-13
whsh_17003_e19r 2012 3' - 97bp Contig6477            
whsh_2003_e19r 2012 3' - 334bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 5.79565e-17
whsh_18083_e24f 2012 5' - 213bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.116222
whsh_16027_g08f 2012 5' - 257bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.11954
whsh_16027_g08r 2012 3' - 280bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.00042676
whsh_1011_g13r 2012 3' - 369bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.11282e-28
whsh_8075_g23f 2012 5' - 135bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.34018
whsh_8075_g23r 2012 3' - 80bp Contig6477            
whsh_8076_h05f 2012 5' - 222bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.11957
whsh_8076_h05r 2012 3' - 186bp Contig6477       hypotheticalprotein,unlikely[TrypanosomabruceigambienseDAL972] 35 8.6068
whsh_16012_h07f 2012 5' - 208bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.116997
whsh_16012_h07r 2012 3' - 190bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 35 6.54746
whsh_16028_h08r 2012 3' - 186bp Contig6477       hypotheticalprotein,unlikely[TrypanosomabruceigambienseDAL972] 35 8.6068
whsh_2022_j02r 2012 3' - 124bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 41 0.0903478
whsh_5054_j10r 2012 3' - 76bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 36 3.81686
whsh_1013_k01f 2012 5' - 280bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0521679
whsh_1013_k01r 2012 3' - 259bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.346601
whsh_13029_k08f 2012 5' - 329bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.69316e-13
whsh_13029_k08r 2012 3' - 300bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 4.035e-18
whsh_3093_k24f 2012 5' - 294bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.053329
whsh_3093_k24r 2012 3' - 289bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.119663
whsh_7030_l14f 2012 5' - 426bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.13269e-28
whsh_7030_l14r 2012 3' - 372bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.14202e-28
whsh_17055_m16f 2012 5' - 143bp Contig6477       hypotheticalprotein,unlikely[TrypanosomabruceigambienseDAL972] 35 8.30154
whsh_17055_m16r 2012 3' - 142bp Contig6477       hypotheticalprotein,unlikely[TrypanosomabruceigambienseDAL972] 35 8.30154
whsh_5007_m19f 2012 5' - 133bp Contig6477       DMTsuperfamilydrug/metabolitetransporter[CorynebacteriumglucuronolyticumATCC51866] 36 4.91218
whsh_12024_n02r 2012 3' - 54bp Contig6477            
whsh_13056_n16f 2012 5' - 214bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0523437
whsh_13056_n16r 2012 3' - 210bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0523437
whsh_8008_n19r 2012 3' - 465bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.30873e-52
whsh_15031_o20f 2012 5' - 254bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0538456
whsh_15031_o20r 2012 3' - 236bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.117964
whsh_12032_p02f 2012 5' - 460bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 126 2.1028e-27
whsh_12032_p02r 2012 3' - 418bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.14703e-28
whsh_4064_p04f 2012 5' - 573bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.76767e-97
whsh_1048_p15f 2012 5' - 57bp Contig6477            
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