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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 155
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_6016_a04f 2012 5' Shoot grown under cold condition for 3days 690bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_6016_a04r 2012 3' Shoot grown under cold condition for 3days 685bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.15272e-89
whv3_18079_a18f 2012 5' Shoot grown under cold condition for 3days 711bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv3_17079_a18r 2012 3' Shoot grown under cold condition for 3days 672bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv3_13016_b03f 2012 5' Shoot grown under cold condition for 3days 684bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whv3_13016_b03r 2012 3' Shoot grown under cold condition for 3days 653bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_17016_b04f 2012 5' Shoot grown under cold condition for 3days 567bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.69869e-97
whv3_18016_b04r 2012 3' Shoot grown under cold condition for 3days 654bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.15266e-87
whv3_15031_b05f 2012 5' Shoot grown under cold condition for 3days 465bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 229 2.35528e-58
whv3_15031_b05r 2012 3' Shoot grown under cold condition for 3days 277bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.73715e-49
whv3_16048_b11f 2012 5' Shoot grown under cold condition for 3days 697bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.24482e-88
whv3_16048_b11r 2012 3' Shoot grown under cold condition for 3days 690bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 5.45831e-95
whv3_10063_b13f 2012 5' Shoot grown under cold condition for 3days 762bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv3_10063_b13r 2012 3' Shoot grown under cold condition for 3days 658bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.56054e-84
whv3_11064_b15f 2012 5' Shoot grown under cold condition for 3days 693bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_11064_b15r 2012 3' Shoot grown under cold condition for 3days 697bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv3_20079_b17f 2012 5' Shoot grown under cold condition for 3days 693bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_20079_b17r 2012 3' Shoot grown under cold condition for 3days 696bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.42363e-90
whv3_20096_b23f 2012 5' Shoot grown under cold condition for 3days 692bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_20096_b23r 2012 3' Shoot grown under cold condition for 3days 671bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv3_12014_c03f 2012 5' Shoot grown under cold condition for 3days 695bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_4014_c03f 2012 5' Shoot grown under cold condition for 3days 712bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whv3_12014_c03r 2012 3' Shoot grown under cold condition for 3days 673bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.39156e-92
whv3_4014_c03r 2012 3' Shoot grown under cold condition for 3days 715bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.24401e-97
whv3_6029_c05f 2012 5' Shoot grown under cold condition for 3days 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_6029_c05r 2012 3' Shoot grown under cold condition for 3days 671bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.09007e-89
whv3_8062_c15r 2012 3' Shoot grown under cold condition for 3days 58bp Contig7252       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 44 0.0131797
whv3_13093_c22f 2012 5' Shoot grown under cold condition for 3days 688bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_13093_c22r 2012 3' Shoot grown under cold condition for 3days 666bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.15682e-91
whv3_12013_d01f 2012 5' Shoot grown under cold condition for 3days 639bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whv3_12013_d01r 2012 3' Shoot grown under cold condition for 3days 616bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.35821e-98
whv3_12030_d08f 2012 5' Shoot grown under cold condition for 3days 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_12030_d08r 2012 3' Shoot grown under cold condition for 3days 530bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 1.28943e-81
whv3_10045_d09f 2012 5' Shoot grown under cold condition for 3days 700bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_10045_d09r 2012 3' Shoot grown under cold condition for 3days 634bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 5.9282e-84
whv3_7061_d14f 2012 5' Shoot grown under cold condition for 3days 745bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv3_7061_d14r 2012 3' Shoot grown under cold condition for 3days 723bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.42091e-97
whv3_17062_d15f 2012 5' Shoot grown under cold condition for 3days 626bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.45785e-98
whv3_18062_d15r 2012 3' Shoot grown under cold condition for 3days 668bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.52842e-91
whv3_11093_d21f 2012 5' Shoot grown under cold condition for 3days 697bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_11093_d21r 2012 3' Shoot grown under cold condition for 3days 669bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv3_16093_d21r 2012 3' Shoot grown under cold condition for 3days 41bp Contig7252            
whv3_14011_e01f 2012 5' Shoot grown under cold condition for 3days 698bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_4011_e01f 2012 5' Shoot grown under cold condition for 3days 693bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_4011_e01r 2012 3' Shoot grown under cold condition for 3days 678bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.42411e-94
whv3_15011_e02f 2012 5' Shoot grown under cold condition for 3days 690bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_15011_e02r 2012 3' Shoot grown under cold condition for 3days 630bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.73314e-83
whv3_11027_e06f 2012 5' Shoot grown under cold condition for 3days 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_15043_e09f 2012 5' Shoot grown under cold condition for 3days 672bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.16427e-97
whv3_16043_e09f 2012 5' Shoot grown under cold condition for 3days 696bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_16043_e09r 2012 3' Shoot grown under cold condition for 3days 672bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv3_1091_e22f 2012 5' Shoot grown under cold condition for 3days 516bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 9.9692e-89
whv3_18091_e22f 2012 5' Shoot grown under cold condition for 3days 722bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.37192e-98
whv3_1091_e22r 2012 3' Shoot grown under cold condition for 3days 684bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whv3_17091_e22r 2012 3' Shoot grown under cold condition for 3days 657bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.01215e-84
whv3_1011_f01f 2012 5' Shoot grown under cold condition for 3days 351bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 3.39813e-57
whv3_12011_f02f 2012 5' Shoot grown under cold condition for 3days 689bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.58989e-97
whv3_12011_f02r 2012 3' Shoot grown under cold condition for 3days 657bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 8.95287e-89
whv3_9028_f07f 2012 5' Shoot grown under cold condition for 3days 697bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_9028_f07r 2012 3' Shoot grown under cold condition for 3days 671bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv3_13060_f15f 2012 5' Shoot grown under cold condition for 3days 663bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.80969e-98
whv3_13060_f15r 2012 3' Shoot grown under cold condition for 3days 692bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.37314e-90
whv3_19060_f15r 2012 3' Shoot grown under cold condition for 3days 344bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 90 2.24544e-16
whv3_7075_f18f 2012 5' Shoot grown under cold condition for 3days 704bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv3_7075_f18r 2012 3' Shoot grown under cold condition for 3days 682bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 338 7.89606e-91
whv3_5076_f20f 2012 5' Shoot grown under cold condition for 3days 339bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 127 1.23538e-27
whv3_9092_f24f 2012 5' Shoot grown under cold condition for 3days 556bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 229 3.06682e-58
whv3_9092_f24r 2012 3' Shoot grown under cold condition for 3days 540bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 251 7.00061e-65
whv3_2058_g15f 2012 5' Shoot grown under cold condition for 3days 707bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv3_2058_g15r 2012 3' Shoot grown under cold condition for 3days 688bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.24496e-91
whv3_20058_g16f 2012 5' Shoot grown under cold condition for 3days 698bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_20058_g16r 2012 3' Shoot grown under cold condition for 3days 672bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.37575e-92
whv3_15073_g18f 2012 5' Shoot grown under cold condition for 3days 239bp Contig7252            
whv3_8074_g19f 2012 5' Shoot grown under cold condition for 3days 709bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv3_8074_g19r 2012 3' Shoot grown under cold condition for 3days 676bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 5.91293e-91
whv3_11089_g22f 2012 5' Shoot grown under cold condition for 3days 708bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv3_11089_g22r 2012 3' Shoot grown under cold condition for 3days 484bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 232 2.72061e-59
whv3_17009_h02f 2012 5' Shoot grown under cold condition for 3days 513bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 3.45124e-94
whv3_18009_h02r 2012 3' Shoot grown under cold condition for 3days 659bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.02434e-84
whv3_15010_h03f 2012 5' Shoot grown under cold condition for 3days 711bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 9.52505e-98
whv3_15010_h03r 2012 3' Shoot grown under cold condition for 3days 669bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.44016e-89
whv3_10042_h12f 2012 5' Shoot grown under cold condition for 3days 698bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_10042_h12r 2012 3' Shoot grown under cold condition for 3days 682bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whv3_15057_h13f 2012 5' Shoot grown under cold condition for 3days 712bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whv3_15057_h13r 2012 3' Shoot grown under cold condition for 3days 652bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 2.81147e-87
whv3_8007_i02f 2012 5' Shoot grown under cold condition for 3days 679bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv3_8007_i02r 2012 3' Shoot grown under cold condition for 3days 700bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.58364e-97
whv3_5008_i04f 2012 5' Shoot grown under cold condition for 3days 188bp Contig7252       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 37 1.72861
whv3_4023_i06f 2012 5' Shoot grown under cold condition for 3days 778bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv3_4023_i06r 2012 3' Shoot grown under cold condition for 3days 692bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.64345e-91
whv3_12024_i08r 2012 3' Shoot grown under cold condition for 3days 608bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 286 3.5088e-75
whv3_14056_i16f 2012 5' Shoot grown under cold condition for 3days 708bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 336 5.62426e-90
whv3_11088_i23f 2012 5' Shoot grown under cold condition for 3days 729bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_11088_i23r 2012 3' Shoot grown under cold condition for 3days 674bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.17803e-91
whv3_9007_j02r 2012 3' Shoot grown under cold condition for 3days 662bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 8.47939e-87
whv3_18023_j05f 2012 5' Shoot grown under cold condition for 3days 681bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv3_20023_j05f 2012 5' Shoot grown under cold condition for 3days 637bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 308 7.34335e-82
whv3_3023_j05f 2012 5' Shoot grown under cold condition for 3days 292bp Contig7252       PREDICTED:hypotheticalproteinLOC100565328[Anoliscarolinensis] 35 8.51411
whv3_17023_j05r 2012 3' Shoot grown under cold condition for 3days 675bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.48425e-89
whv3_20023_j05r 2012 3' Shoot grown under cold condition for 3days 335bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 234 1.22863e-59
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