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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 33
First Previous 1-33 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_16096_a24f 2012 5' Shoot grown under cold condition for 3days 687bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 449 3.24596e-124
whv3_10095_b22f 2012 5' Shoot grown under cold condition for 3days 579bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 375 6.53961e-102
whv3_10095_b22r 2012 3' Shoot grown under cold condition for 3days 366bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 147 1.50054e-33
whv3_14013_c02f 2012 5' Shoot grown under cold condition for 3days 618bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 397 1.47367e-108
whv3_14013_c02r 2012 3' Shoot grown under cold condition for 3days 380bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 163 2.06001e-38
whv3_8078_c19f 2012 5' Shoot grown under cold condition for 3days 592bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 388 4.74724e-106
whv3_16076_e19f 2012 5' Shoot grown under cold condition for 3days 629bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 406 2.56592e-111
whv3_1059_f14r 2012 3' Shoot grown under cold condition for 3days 314bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 149 3.01925e-34
whv3_14059_f14r 2012 3' Shoot grown under cold condition for 3days 470bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33149e-53
whv3_10075_f17f 2012 5' Shoot grown under cold condition for 3days 665bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 420 1.50038e-115
whv3_10075_f17r 2012 3' Shoot grown under cold condition for 3days 470bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33149e-53
whv3_16089_g22f 2012 5' Shoot grown under cold condition for 3days 629bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 406 3.35119e-111
whv3_16089_g22r 2012 3' Shoot grown under cold condition for 3days 347bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 133 3.00923e-29
whv3_3058_h16f 2012 5' Shoot grown under cold condition for 3days 625bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 406 3.30651e-111
whv3_3058_h16r 2012 3' Shoot grown under cold condition for 3days 351bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 160 1.34249e-37
whv3_2023_i06f 2012 5' Shoot grown under cold condition for 3days 582bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 379 3.52637e-103
whv3_2023_i06r 2012 3' Shoot grown under cold condition for 3days 413bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31363e-53
whv3_16087_i21f 2012 5' Shoot grown under cold condition for 3days 635bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 413 1.62082e-113
whv3_16087_i21r 2012 3' Shoot grown under cold condition for 3days 470bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 7.06014e-55
whv3_8006_k03r 2012 3' Shoot grown under cold condition for 3days 354bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 139 4.16684e-31
whv3_8054_k16r 2012 3' Shoot grown under cold condition for 3days 221bp Contig6670       unnamedproteinproduct[Oikopleuradioica] 38 1.01562
whv3_10086_k23f 2012 5' Shoot grown under cold condition for 3days 648bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 420 1.3957e-115
whv3_10086_k23r 2012 3' Shoot grown under cold condition for 3days 354bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 140 1.42659e-31
whv3_10068_m20f 2012 5' Shoot grown under cold condition for 3days 655bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 425 4.44713e-117
whv3_10068_m20r 2012 3' Shoot grown under cold condition for 3days 499bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.22499e-59
whv3_5084_m24f 2012 5' Shoot grown under cold condition for 3days 394bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 253 1.94534e-65
whv3_5084_m24r 2012 3' Shoot grown under cold condition for 3days 352bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 139 4.16684e-31
whv3_17019_n05f 2012 5' Shoot grown under cold condition for 3days 452bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 294 1.00769e-77
whv3_18019_n05r 2012 3' Shoot grown under cold condition for 3days 406bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 160 1.3307e-37
whv3_8066_o20f 2012 5' Shoot grown under cold condition for 3days 611bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 397 1.09656e-108
whv3_8066_o20r 2012 3' Shoot grown under cold condition for 3days 474bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.32556e-53
whv3_12002_p03f 2012 5' Shoot grown under cold condition for 3days 514bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 336 1.81681e-90
whv3_12002_p03r 2012 3' Shoot grown under cold condition for 3days 385bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 160 1.32994e-37
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