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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 91
First Previous 1-91 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_169016_a03f 2012 5' Shoot grown under cold condition for 16days 57bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0293613
whv_1610048_b12f 2012 5' Shoot grown under cold condition for 16days 748bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.66656e-98
whv_1610048_b12r 2012 3' Shoot grown under cold condition for 16days 715bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.17395e-97
whv_168064_b16f 2012 5' Shoot grown under cold condition for 16days 707bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv_168064_b16r 2012 3' Shoot grown under cold condition for 16days 629bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.48407e-92
whv_1613079_b17f 2012 5' Shoot grown under cold condition for 16days 282bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00471839
whv_1614014_c03f 2012 5' Shoot grown under cold condition for 16days 596bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 244 1.91808e-62
whv_1614014_c03r 2012 3' Shoot grown under cold condition for 16days 528bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 254 1.26664e-65
whv_1614029_c05r 2012 3' Shoot grown under cold condition for 16days 170bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 128 5.58673e-28
whv_163045_c10f 2012 5' Shoot grown under cold condition for 16days 767bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_163045_c10r 2012 3' Shoot grown under cold condition for 16days 719bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv_1612062_c15f 2012 5' Shoot grown under cold condition for 16days 752bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_1612062_c15r 2012 3' Shoot grown under cold condition for 16days 701bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.28677e-96
whv_1620093_c22f 2012 5' Shoot grown under cold condition for 16days 692bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1620093_c22r 2012 3' Shoot grown under cold condition for 16days 526bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 245 3.44938e-63
whv_161013_d02f 2012 5' Shoot grown under cold condition for 16days 711bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_161013_d02r 2012 3' Shoot grown under cold condition for 16days 700bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.44888e-90
whv_165061_d14f 2012 5' Shoot grown under cold condition for 16days 776bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.90937e-98
whv_165061_d14r 2012 3' Shoot grown under cold condition for 16days 742bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.79135e-97
whv_165093_d21f 2012 5' Shoot grown under cold condition for 16days 680bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv_165093_d21r 2012 3' Shoot grown under cold condition for 16days 665bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv_1616094_d24f 2012 5' Shoot grown under cold condition for 16days 685bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.4544e-97
whv_1616094_d24r 2012 3' Shoot grown under cold condition for 16days 671bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.05582e-84
whv_1613011_e02f 2012 5' Shoot grown under cold condition for 16days 768bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_1613011_e02r 2012 3' Shoot grown under cold condition for 16days 673bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 6.61323e-87
whv_169027_e06f 2012 5' Shoot grown under cold condition for 16days 650bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv_169027_e06r 2012 3' Shoot grown under cold condition for 16days 274bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 7.74268e-46
whv_1612028_e07f 2012 5' Shoot grown under cold condition for 16days 760bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv_164091_e21f 2012 5' Shoot grown under cold condition for 16days 772bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_164091_e21r 2012 3' Shoot grown under cold condition for 16days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv_1616092_e24f 2012 5' Shoot grown under cold condition for 16days 508bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.56922e-49
whv_1616092_e24r 2012 3' Shoot grown under cold condition for 16days 479bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 222 2.82814e-56
whv_1610012_f03f 2012 5' Shoot grown under cold condition for 16days 747bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv_1610012_f03r 2012 3' Shoot grown under cold condition for 16days 720bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.62089e-92
whv_1616059_f14f 2012 5' Shoot grown under cold condition for 16days 296bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 207 9.5499e-52
whv_162026_g08f 2012 5' Shoot grown under cold condition for 16days 724bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_162026_g08r 2012 3' Shoot grown under cold condition for 16days 666bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv_1617026_h07f 2012 5' Shoot grown under cold condition for 16days 668bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.17957e-97
whv_1617026_h07r 2012 3' Shoot grown under cold condition for 16days 687bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.40357e-87
whv_168041_h09f 2012 5' Shoot grown under cold condition for 16days 696bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_168041_h09r 2012 3' Shoot grown under cold condition for 16days 656bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whv_165058_h15f 2012 5' Shoot grown under cold condition for 16days 376bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.06715e-18
whv_169073_h17f 2012 5' Shoot grown under cold condition for 16days 695bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_161023_i06f 2012 5' Shoot grown under cold condition for 16days 690bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv_161023_i06r 2012 3' Shoot grown under cold condition for 16days 708bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 1.79117e-88
whv_161024_i08f 2012 5' Shoot grown under cold condition for 16days 685bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whv_161056_i15f 2012 5' Shoot grown under cold condition for 16days 756bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_161056_i15r 2012 3' Shoot grown under cold condition for 16days 677bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 7.00095e-84
whv_164087_i21f 2012 5' Shoot grown under cold condition for 16days 766bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_164087_i21r 2012 3' Shoot grown under cold condition for 16days 704bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.65519e-97
whv_1617088_i23r 2012 3' Shoot grown under cold condition for 16days 272bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 5.74911e-49
whv_169006_k04f 2012 5' Shoot grown under cold condition for 16days 756bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_169006_k04r 2012 3' Shoot grown under cold condition for 16days 677bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_168021_k05f 2012 5' Shoot grown under cold condition for 16days 705bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv_168021_k05r 2012 3' Shoot grown under cold condition for 16days 674bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.45947e-97
whv_1611037_k09f 2012 5' Shoot grown under cold condition for 16days 450bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 312 3.5913e-83
whv_1611037_k09r 2012 3' Shoot grown under cold condition for 16days 266bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.64684e-11
whv_1610085_k21f 2012 5' Shoot grown under cold condition for 16days 758bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv_1610085_k21r 2012 3' Shoot grown under cold condition for 16days 700bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.20005e-97
whv_164006_l03f 2012 5' Shoot grown under cold condition for 16days 714bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.78559e-89
whv_164006_l03r 2012 3' Shoot grown under cold condition for 16days 667bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv_165022_l08f 2012 5' Shoot grown under cold condition for 16days 768bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv_165022_l08r 2012 3' Shoot grown under cold condition for 16days 723bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1610085_l22f 2012 5' Shoot grown under cold condition for 16days 694bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1610085_l22r 2012 3' Shoot grown under cold condition for 16days 659bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.13093e-90
whv_165004_m03f 2012 5' Shoot grown under cold condition for 16days 743bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.60108e-98
whv_165004_m03r 2012 3' Shoot grown under cold condition for 16days 675bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.89486e-98
whv_166036_n11r 2012 3' Shoot grown under cold condition for 16days 72bp Contig6477       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 53 2.12542e-05
whv_1614068_n19f 2012 5' Shoot grown under cold condition for 16days 749bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.66656e-98
whv_1614068_n19r 2012 3' Shoot grown under cold condition for 16days 622bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 5.60269e-87
whv_1614068_n20f 2012 5' Shoot grown under cold condition for 16days 640bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.5783e-98
whv_1614068_n20r 2012 3' Shoot grown under cold condition for 16days 481bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 224 7.44248e-57
whv_161033_o09f 2012 5' Shoot grown under cold condition for 16days 705bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv_161033_o09r 2012 3' Shoot grown under cold condition for 16days 687bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.40357e-87
whv_1618049_o13f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.61645e-97
whv_1618049_o13r 2012 3' Shoot grown under cold condition for 16days 663bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.97593e-92
whv_162066_o20f 2012 5' Shoot grown under cold condition for 16days 765bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv_162066_o20r 2012 3' Shoot grown under cold condition for 16days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv_161081_o21f 2012 5' Shoot grown under cold condition for 16days 649bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv_161081_o21r 2012 3' Shoot grown under cold condition for 16days 677bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 7.00095e-84
whv_1620001_p01f 2012 5' Shoot grown under cold condition for 16days 739bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_1620001_p01r 2012 3' Shoot grown under cold condition for 16days 690bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.51834e-97
whv_1613002_p04f 2012 5' Shoot grown under cold condition for 16days 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv_1613002_p04r 2012 3' Shoot grown under cold condition for 16days 674bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_1619033_p10f 2012 5' Shoot grown under cold condition for 16days 196bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0532136
whv_1619033_p10r 2012 3' Shoot grown under cold condition for 16days 197bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.344921
whv_1613050_p16f 2012 5' Shoot grown under cold condition for 16days 744bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.60108e-98
whv_1613050_p16r 2012 3' Shoot grown under cold condition for 16days 628bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.01371e-91
whv_164081_p21f 2012 5' Shoot grown under cold condition for 16days 691bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_165081_p21f 2012 5' Shoot grown under cold condition for 16days 386bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 262 4.2218e-68
whv_164081_p21r 2012 3' Shoot grown under cold condition for 16days 710bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.75019e-97
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