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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 58
First Previous 1-58 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_9048_b11f 2012 5' Shoot grown under cold condition for 3days 723bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 482 3.85052e-134
whv3_9048_b11r 2012 3' Shoot grown under cold condition for 3days 631bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 267 3.26767e-88
whv3_9013_c01r 2012 3' Shoot grown under cold condition for 3days 551bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 204 1.45219e-69
whv3_18046_c11f 2012 5' Shoot grown under cold condition for 3days 731bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 445 5.31653e-123
whv3_17046_c11r 2012 3' Shoot grown under cold condition for 3days 590bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 235 8.07734e-79
whv3_11030_d07f 2012 5' Shoot grown under cold condition for 3days 56bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 37 1.23358
whv3_9011_e01f 2012 5' Shoot grown under cold condition for 3days 621bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 411 5.94445e-113
whv3_9011_e01r 2012 3' Shoot grown under cold condition for 3days 613bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 232 5.65265e-78
whv3_3011_e02f 2012 5' Shoot grown under cold condition for 3days 687bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 464 9.64584e-129
whv3_3011_e02r 2012 3' Shoot grown under cold condition for 3days 643bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 282 1.08125e-92
whv3_1012_e04f 2012 5' Shoot grown under cold condition for 3days 354bp Contig7521       ribulose-1,5-bisphosphatecarboxylase/oxygenaseactivasesmallisoform[Hordeumvulgaresubsp.vulgare] 191 9.23978e-47
whv3_1012_e04r 2012 3' Shoot grown under cold condition for 3days 636bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 266 4.37584e-88
whv3_5091_e22f 2012 5' Shoot grown under cold condition for 3days 724bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 448 6.16173e-124
whv3_5091_e22r 2012 3' Shoot grown under cold condition for 3days 607bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 243 3.22461e-81
whv3_12028_f07f 2012 5' Shoot grown under cold condition for 3days 685bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 415 6.63807e-114
whv3_12028_f07r 2012 3' Shoot grown under cold condition for 3days 510bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 178 6.13291e-62
whv3_5073_g18f 2012 5' Shoot grown under cold condition for 3days 721bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 448 1.03082e-123
whv3_5073_g18r 2012 3' Shoot grown under cold condition for 3days 550bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 211 9.34773e-72
whv3_17090_g24f 2012 5' Shoot grown under cold condition for 3days 638bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 395 7.89381e-108
whv3_3042_h12f 2012 5' Shoot grown under cold condition for 3days 703bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 480 2.36327e-133
whv3_3042_h12r 2012 3' Shoot grown under cold condition for 3days 608bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 243 3.27251e-81
whv3_13074_h19f 2012 5' Shoot grown under cold condition for 3days 164bp Contig7521       Ribulosebisphosphatecarboxylase/oxygenaseactivase,chloroplastprecursor,putative,expressed[OryzasativaJaponicaGroup] 39 0.585882
whv3_13074_h19r 2012 3' Shoot grown under cold condition for 3days 87bp Contig7521       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.40914e-08
whv3_12090_h23f 2012 5' Shoot grown under cold condition for 3days 264bp Contig7521       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 7.34977e-44
whv3_18055_i14f 2012 5' Shoot grown under cold condition for 3days 727bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 446 3.99392e-123
whv3_1071_i17f 2012 5' Shoot grown under cold condition for 3days 685bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 419 3.55849e-115
whv3_1071_i17r 2012 3' Shoot grown under cold condition for 3days 653bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 265 1.03417e-87
whv3_20088_i23f 2012 5' Shoot grown under cold condition for 3days 494bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 132 3.09701e-48
whv3_20088_i23r 2012 3' Shoot grown under cold condition for 3days 461bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 148 5.82663e-53
whv3_6005_k02f 2012 5' Shoot grown under cold condition for 3days 715bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 448 7.73795e-124
whv3_6005_k02r 2012 3' Shoot grown under cold condition for 3days 498bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 181 9.4593e-63
whv3_14069_k18f 2012 5' Shoot grown under cold condition for 3days 750bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 464 1.1686e-128
whv3_14069_k18r 2012 3' Shoot grown under cold condition for 3days 511bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 167 1.34776e-58
whv3_3070_k20r 2012 3' Shoot grown under cold condition for 3days 98bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 70 2.33649e-10
whv3_6086_k23f 2012 5' Shoot grown under cold condition for 3days 724bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 448 6.16173e-124
whv3_6086_k23r 2012 3' Shoot grown under cold condition for 3days 240bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 165 7.02598e-39
whv3_16086_k24f 2012 5' Shoot grown under cold condition for 3days 591bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 198 9.72319e-68
whv3_16086_k24r 2012 3' Shoot grown under cold condition for 3days 578bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 224 2.18922e-75
whv3_3035_m10f 2012 5' Shoot grown under cold condition for 3days 716bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 450 2.68609e-124
whv3_3035_m10r 2012 3' Shoot grown under cold condition for 3days 586bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 229 5.48876e-77
whv3_3036_m11f 2012 5' Shoot grown under cold condition for 3days 748bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 465 6.85098e-129
whv3_3036_m11r 2012 3' Shoot grown under cold condition for 3days 544bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 205 4.82438e-70
whv3_14052_m16f 2012 5' Shoot grown under cold condition for 3days 778bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 476 4.13824e-132
whv3_14052_m16r 2012 3' Shoot grown under cold condition for 3days 482bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 158 7.69421e-56
whv3_11068_m19f 2012 5' Shoot grown under cold condition for 3days 693bp Contig7521       RecName:Full=Ribulosebisphosphatecarboxylase/oxygenaseactivaseA,chloroplastic;Short=RAA;Short=RuBisCOactivaseA;Flags:Precursor 363 2.70888e-113
whv3_11068_m19r 2012 3' Shoot grown under cold condition for 3days 459bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 146 2.87208e-52
whv3_9004_n03f 2012 5' Shoot grown under cold condition for 3days 672bp Contig7521       predictedprotein[Hordeumvulgaresubsp.vulgare] 457 1.11504e-126
whv3_9004_n03r 2012 3' Shoot grown under cold condition for 3days 566bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 207 1.4604e-70
whv3_16052_n15f 2012 5' Shoot grown under cold condition for 3days 698bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 444 1.07787e-122
whv3_1017_o06f 2012 5' Shoot grown under cold condition for 3days 251bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 69 3.04443e-10
whv3_17017_o06f 2012 5' Shoot grown under cold condition for 3days 600bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 364 9.84007e-99
whv3_2017_o06f 2012 5' Shoot grown under cold condition for 3days 677bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 459 3.00178e-127
whv3_1017_o06r 2012 3' Shoot grown under cold condition for 3days 194bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 79 3.94098e-13
whv3_18017_o06r 2012 3' Shoot grown under cold condition for 3days 514bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 191 9.58544e-66
whv3_2017_o06r 2012 3' Shoot grown under cold condition for 3days 536bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 207 1.23257e-70
whv3_13049_o13f 2012 5' Shoot grown under cold condition for 3days 656bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 406 2.16381e-111
whv3_14034_p11f 2012 5' Shoot grown under cold condition for 3days 651bp Contig7521       Unknown(proteinforMGC:35458)[Homosapiens] 396 2.854e-108
whv3_14034_p11r 2012 3' Shoot grown under cold condition for 3days 612bp Contig7521       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 241 1.65893e-80
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