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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 95
First Previous 1-95 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_12020_m08f 2012 5' Callus 258bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 172 5.86432e-41
whcs_12020_m08r 2012 3' Callus 714bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 379 4.45845e-103
whe_7082_b18r 2012 3' Seed DPA10 470bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 214 1.33149e-53
whei_9093_c22r 2012 3' Dormant seed with water absorption after breaking 593bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 268 7.15993e-70
whei_20091_f21f 2012 5' Dormant seed with water absorption after breaking 477bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 319 1.69993e-85
whei_19088_j23f 2012 5' Dormant seed with water absorption after breaking 288bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 122 4.08424e-26
whei_19088_j24f 2012 5' Dormant seed with water absorption after breaking 40bp Contig17936            
whei_5067_m18r 2012 3' Dormant seed with water absorption after breaking 534bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 214 1.55163e-53
whei_2033_p09f 2012 5' Dormant seed with water absorption after breaking 541bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 364 9.67834e-99
whem_11062_d15f 2012 5' Dormant seed with water absorption 249bp Contig17936       hypotheticalproteinMYCTH_2294830[MyceliophthorathermophilaATCC42464] 35 8.31004
whem_11062_d15r 2012 3' Dormant seed with water absorption 215bp Contig17936       hypotheticalproteinTRIVIDRAFT_35252[TrichodermavirensGv29-8] 35 6.37731
whem_14057_g14f 2012 5' Dormant seed with water absorption 419bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 279 2.6078e-73
whem_14057_g14r 2012 3' Dormant seed with water absorption 574bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 287 1.34984e-75
whem_4086_l24f 2012 5' Dormant seed with water absorption 477bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 181 7.22536e-44
whem_5086_l24f 2012 5' Dormant seed with water absorption 109bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 56 3.59865e-06
whem_4086_l24r 2012 3' Dormant seed with water absorption 444bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 201 6.86563e-50
whem_18068_m19f 2012 5' Dormant seed with water absorption 412bp Contig17936       chaperoneDNAJ2[Zeamays] 269 2.02564e-70
whem_18068_m19r 2012 3' Dormant seed with water absorption 572bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 289 4.55934e-76
whf_14069_f11r 2012 3' Spike at flowering date 468bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 178 4.76778e-43
whh_6049_a04r 2012 3' Spike at heading date 265bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 87 1.88646e-15
whh_26031_l02f 2012 5' Spike at heading date 485bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 320 1.32982e-85
whh_23041_p14f 2012 5' Spike at heading date 551bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 359 2.46945e-97
whkp_5072_j19f 2012 5' Shoot grown under continuous light 692bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 460 2.4275e-127
whkp_5072_j19r 2012 3' Shoot grown under continuous light 760bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 352 8.75469e-95
whkp_17018_p07f 2012 5' Shoot grown under continuous light 664bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 297 1.91567e-78
whkp_17018_p07r 2012 3' Shoot grown under continuous light 595bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 304 1.19585e-80
whr_10071_j23r 2012 3' Root 511bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 211 6.58467e-53
whr_8025_p01r 2012 3' Root 140bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 86 4.11369e-15
whsl_24034_b03f 2012 5' Seed DPA30 590bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 306 2.33541e-81
whsl_24034_b03r 2012 3' Seed DPA30 469bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 214 1.33149e-53
whsl_11042_d15r 2012 3' Seed DPA30 449bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 211 6.60589e-53
whsl_17039_j03f 2012 5' Seed DPA30 436bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 231 6.07987e-59
whsl_1061_k04r 2012 3' Seed DPA30 43bp Contig17936            
whsl_4078_k11f 2012 5' Seed DPA30 481bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 316 1.87949e-84
whsl_4077_k11r 2012 3' Seed DPA30 507bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 244 9.20993e-63
whsl_22014_l01r 2012 3' Seed DPA30 563bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 208 7.59258e-52
whsl_31079_o05f 2012 5' Seed DPA30 577bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 364 8.83854e-99
whsl_31079_o05r 2012 3' Seed DPA30 499bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 178 4.69826e-43
whvd_1032_a08f 2012 5' Shoot grown with dessication 648bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 319 4.3791e-85
whvd_1032_a08r 2012 3' Shoot grown with dessication 384bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 164 1.19807e-38
whvs_19002_o04f 2012 5' Liquid cultured tissue 406bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 223 2.19225e-56
whvs_19002_o04r 2012 3' Liquid cultured tissue 675bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 361 1.45303e-97
whxa_1009_g02f 2012 5' Root 620bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 360 2.02446e-97
whxa_1009_g02r 2012 3' Root 650bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 339 4.14033e-91
whxa_14068_m20r 2012 3' Root 751bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 356 5.90602e-96
whxa_15083_m22f 2012 5' Root 360bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 229 3.038e-58
whxa_15083_m22r 2012 3' Root 738bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 389 6.01687e-106
whxb_15042_h11f 2012 5' Root 226bp Contig17936       hypotheticalproteinMYCTH_2294830[MyceliophthorathermophilaATCC42464] 35 8.54019
whxb_15042_h11r 2012 3' Root 187bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 37 1.32355
whxb_16004_n03f 2012 5' Root 456bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 256 2.31837e-66
whxb_16004_n03r 2012 3' Root 608bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 254 1.92981e-65
whxc_11051_n14f 2012 5' Root, treated at 50 microM Al for 6h 528bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 172 3.79543e-41
whxc_11051_n14r 2012 3' Root, treated at 50 microM Al for 6h 505bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 197 1.69413e-48
whxd_22032_b07r 2012 3' Root, treated at 50 microM Al for 6h 522bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 201 9.30051e-50
whxd_30042_g12r 2012 3' Root, treated at 50 microM Al for 6h 40bp Contig17936            
whxf_35089_h21f 2012 5' Seedling, infected with leaf rust 628bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 367 1.72512e-99
whxg_21072_j19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 664bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 354 1.72463e-95
whxg_38069_l17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 545bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 292 3.56187e-77
whxg_38069_l17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 640bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 287 2.34826e-75
whxg_39069_l17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 114bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 52 5.18082e-05
whxg_16084_n23f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 283bp Contig17936       hypotheticalproteinMYCTH_2294830[MyceliophthorathermophilaATCC42464] 35 8.29898
whxg_16084_n23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 250bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 40 0.258325
whxg_25065_p17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 465bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 188 7.89362e-46
whxh_38060_f16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 248bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 168 4.83231e-40
whxh_40087_j22f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 186bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 120 2.64838e-25
whxh_40087_j22r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 576bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 254 1.6539e-65
whxh_37069_k18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 571bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 376 2.83599e-102
whxh_37069_k18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 585bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 258 7.17782e-67
HX017238 whxj_5069_l17f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 426bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 221 6.3724e-56
HX017252 whxj_5069_l17r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 457bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 185 6.53518e-45
HX019395 whxj_14017_p06r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 293bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 106 3.92753e-21
HX029949 whxk_20049_p14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 340bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 181 7.20897e-44
HX046723 whxm_9053_k14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 329bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 127 1.24948e-27
HX079697 whxo_7071_j18f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 638bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 371 7.15623e-101
HX079717 whxo_7071_j18r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 611bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 255 6.73021e-66
HX085025 whxp_37031_a06f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 638bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 371 7.15623e-101
HX085053 whxp_37031_a06r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 630bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 318 7.00276e-85
HX117622 whxq_2071_j17r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 444bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 198 4.46937e-49
HX137175 whxr_16038_k12r 2012 3' Roots, 18 day old plants were grown hydroponically 306bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 112 5.38144e-23
HX140755 whxr_21036_n11f 2012 5' Roots, 18 day old plants were grown hydroponically 723bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 481 1.10956e-133
HX140777 whxr_21036_n11r 2012 3' Roots, 18 day old plants were grown hydroponically 729bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 344 2.15805e-92
HX151292 whxs_5041_g10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 724bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 417 1.98676e-114
HX151319 whxs_5041_g10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 733bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 361 1.73846e-97
HX170244 whxt_13076_f19r 2012 3' Roots, 18 day old plants were grown hydroponically 665bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 344 1.78472e-92
whxv_7050_p16f 2012 5' Leaves, plant was grown at constant 23℃ 702bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 411 7.82315e-113
whxv_7050_p16r 2012 3' Leaves, plant was grown at constant 23℃ 774bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 388 1.13482e-105
whxw_10063_b13f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 725bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 477 2.11285e-132
whxw_10063_b13r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 742bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 344 2.26081e-92
whxy_8070_l19r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 715bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 385 6.22125e-105
whyd_18066_b05f 2012 5' Spikelet at late flowering 574bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 288 6.05915e-76
whyd_18067_b05r 2012 3' Spikelet at late flowering 492bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 235 3.26846e-60
whyd_17091_g12r 2012 3' Spikelet at late flowering 516bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 209 3.34964e-52
whyd_11006_j19f 2012 5' Spikelet at late flowering 262bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 105 6.69401e-21
whyd_11006_j19r 2012 3' Spikelet at late flowering 458bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 214 1.31374e-53
whyd_24029_k08f 2012 5' Spikelet at late flowering 571bp Contig17936       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 366 2.24709e-99
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