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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 26
First Previous 1-26 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_20016_a03f 2012 5' Shoot grown under cold condition for 3days 212bp Contig18019            
whv3_20079_a18f 2012 5' Shoot grown under cold condition for 3days 193bp Contig18019            
whv3_20079_a18r 2012 3' Shoot grown under cold condition for 3days 49bp Contig18019       PREDICTED:photosystemII10kDapolypeptide,chloroplastic-likeisoform1[Brachypodiumdistachyon] 37 1.4321
whv3_18080_a19f 2012 5' Shoot grown under cold condition for 3days 548bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.09688e-65
whv3_17080_a19r 2012 3' Shoot grown under cold condition for 3days 472bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.85024e-66
whv3_13064_b16r 2012 3' Shoot grown under cold condition for 3days 523bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.25747e-66
whv3_6061_c14f 2012 5' Shoot grown under cold condition for 3days 570bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.22268e-65
whv3_6061_c14r 2012 3' Shoot grown under cold condition for 3days 507bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.89987e-66
whv3_17045_d09f 2012 5' Shoot grown under cold condition for 3days 513bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.85826e-66
whv3_18045_d09r 2012 3' Shoot grown under cold condition for 3days 537bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.03596e-65
whv3_1062_d16f 2012 5' Shoot grown under cold condition for 3days 303bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 2.11698e-43
whv3_1062_d16r 2012 3' Shoot grown under cold condition for 3days 537bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.03596e-65
whv3_9087_i21f 2012 5' Shoot grown under cold condition for 3days 577bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.26634e-65
whv3_9087_i21r 2012 3' Shoot grown under cold condition for 3days 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whv3_17088_i23f 2012 5' Shoot grown under cold condition for 3days 410bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 193 1.84491e-47
whv3_18088_i23r 2012 3' Shoot grown under cold condition for 3days 390bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.2057e-52
whv3_18006_l03f 2012 5' Shoot grown under cold condition for 3days 661bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.81654e-65
whv3_17006_l03r 2012 3' Shoot grown under cold condition for 3days 168bp Contig18019            
whv3_17054_l15f 2012 5' Shoot grown under cold condition for 3days 606bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.4776e-65
whv3_18054_l15r 2012 3' Shoot grown under cold condition for 3days 585bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.33184e-65
whv3_6004_n04r 2012 3' Shoot grown under cold condition for 3days 420bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.38331e-52
whv3_10020_n08f 2012 5' Shoot grown under cold condition for 3days 591bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.37551e-65
whv3_4035_n10f 2012 5' Shoot grown under cold condition for 3days 525bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.47789e-66
whv3_4035_n10r 2012 3' Shoot grown under cold condition for 3days 475bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.8107e-66
whv3_4049_o14f 2012 5' Shoot grown under cold condition for 3days 524bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.47789e-66
whv3_4049_o14r 2012 3' Shoot grown under cold condition for 3days 476bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.8107e-66
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