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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 159
First Previous 1-100 101-159 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_166016_a03r 2012 3' Shoot grown under cold condition for 16days 117bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.7901e-13
whv_169016_a04r 2012 3' Shoot grown under cold condition for 16days 678bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_1614048_a12f 2012 5' Shoot grown under cold condition for 16days 784bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.00711e-98
whv_1614048_a12r 2012 3' Shoot grown under cold condition for 16days 679bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.08009e-84
whv_1620063_a13f 2012 5' Shoot grown under cold condition for 16days 741bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_1620063_a13r 2012 3' Shoot grown under cold condition for 16days 678bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.22767e-97
whv_1611063_a14f 2012 5' Shoot grown under cold condition for 16days 708bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv_1611063_a14r 2012 3' Shoot grown under cold condition for 16days 637bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whv_169079_a18f 2012 5' Shoot grown under cold condition for 16days 719bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv_169079_a18r 2012 3' Shoot grown under cold condition for 16days 646bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.69854e-92
whv_167080_a20f 2012 5' Shoot grown under cold condition for 16days 760bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv_167080_a20r 2012 3' Shoot grown under cold condition for 16days 650bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.28706e-92
whv_1614096_a23f 2012 5' Shoot grown under cold condition for 16days 695bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_1614096_a23r 2012 3' Shoot grown under cold condition for 16days 669bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.37575e-92
whv_1618031_b05f 2012 5' Shoot grown under cold condition for 16days 110bp Contig11974            
whv_165064_b15r 2012 3' Shoot grown under cold condition for 16days 675bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_164064_b16f 2012 5' Shoot grown under cold condition for 16days 740bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_164064_b16r 2012 3' Shoot grown under cold condition for 16days 649bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.69854e-92
whv_168096_b23f 2012 5' Shoot grown under cold condition for 16days 690bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_168096_b23r 2012 3' Shoot grown under cold condition for 16days 687bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whv_165096_b24f 2012 5' Shoot grown under cold condition for 16days 700bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv_165096_b24r 2012 3' Shoot grown under cold condition for 16days 669bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_1610030_c07f 2012 5' Shoot grown under cold condition for 16days 367bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.48908e-14
whv_167062_c16f 2012 5' Shoot grown under cold condition for 16days 769bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.90786e-97
whv_167062_c16r 2012 3' Shoot grown under cold condition for 16days 694bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 6.31155e-91
whv_1616078_c19f 2012 5' Shoot grown under cold condition for 16days 237bp Contig11974       unnamedproteinproduct[TrypanosomacongolenseIL3000] 36 4.93927
whv_1618078_c19f 2012 5' Shoot grown under cold condition for 16days 616bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.16263e-95
whv_1616078_c19r 2012 3' Shoot grown under cold condition for 16days 230bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00482188
whv_1618078_c19r 2012 3' Shoot grown under cold condition for 16days 669bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.28392e-87
whv_1618078_c20r 2012 3' Shoot grown under cold condition for 16days 650bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 320 2.59936e-85
whv_1614029_d05f 2012 5' Shoot grown under cold condition for 16days 737bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv_1614029_d05r 2012 3' Shoot grown under cold condition for 16days 675bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 6.05017e-88
whv_165077_d17f 2012 5' Shoot grown under cold condition for 16days 516bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 229 2.45336e-58
whv_165077_d17r 2012 3' Shoot grown under cold condition for 16days 739bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 7.44046e-96
whv_1615093_d21f 2012 5' Shoot grown under cold condition for 16days 515bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 1.58792e-94
whv_166093_d22f 2012 5' Shoot grown under cold condition for 16days 785bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.00711e-98
whv_166093_d22r 2012 3' Shoot grown under cold condition for 16days 696bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.4169e-92
whv_165094_d23f 2012 5' Shoot grown under cold condition for 16days 764bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv_165094_d23r 2012 3' Shoot grown under cold condition for 16days 669bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.37575e-92
whv_1619011_e01f 2012 5' Shoot grown under cold condition for 16days 708bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_1619011_e01r 2012 3' Shoot grown under cold condition for 16days 648bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whv_1613012_e03f 2012 5' Shoot grown under cold condition for 16days 715bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.61951e-97
whv_1613012_e03r 2012 3' Shoot grown under cold condition for 16days 127bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 4.91955e-16
whv_162028_e07f 2012 5' Shoot grown under cold condition for 16days 693bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_162028_e07r 2012 3' Shoot grown under cold condition for 16days 667bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.29732e-94
whv_161028_e08r 2012 3' Shoot grown under cold condition for 16days 593bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 292 4.63018e-77
whv_1617044_e12f 2012 5' Shoot grown under cold condition for 16days 653bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv_1617044_e12r 2012 3' Shoot grown under cold condition for 16days 716bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv_1615075_e18f 2012 5' Shoot grown under cold condition for 16days 240bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 89 2.88227e-16
whv_1615075_e18r 2012 3' Shoot grown under cold condition for 16days 328bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.15868e-57
whv_1612027_f06r 2012 3' Shoot grown under cold condition for 16days 287bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.25738e-51
whv_162044_f12f 2012 5' Shoot grown under cold condition for 16days 697bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_162044_f12r 2012 3' Shoot grown under cold condition for 16days 670bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_169060_f15f 2012 5' Shoot grown under cold condition for 16days 723bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_169060_f15r 2012 3' Shoot grown under cold condition for 16days 696bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv_169060_f16r 2012 3' Shoot grown under cold condition for 16days 652bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.88583e-83
whv_1612091_f21f 2012 5' Shoot grown under cold condition for 16days 751bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_1620091_f21f 2012 5' Shoot grown under cold condition for 16days 778bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv_1612091_f21r 2012 3' Shoot grown under cold condition for 16days 663bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.07016e-89
whv_1620091_f21r 2012 3' Shoot grown under cold condition for 16days 655bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.48149e-84
whv_1615092_f24f 2012 5' Shoot grown under cold condition for 16days 573bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.76767e-97
whv_1617010_g04r 2012 3' Shoot grown under cold condition for 16days 655bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.48149e-84
whv_1610025_g06f 2012 5' Shoot grown under cold condition for 16days 774bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.87679e-98
whv_1610025_g06r 2012 3' Shoot grown under cold condition for 16days 715bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.7745e-97
whv_1617041_g09f 2012 5' Shoot grown under cold condition for 16days 638bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.80013e-97
whv_1617041_g09r 2012 3' Shoot grown under cold condition for 16days 515bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 322 3.54573e-86
whv_1610042_g11f 2012 5' Shoot grown under cold condition for 16days 707bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv_1610042_g11r 2012 3' Shoot grown under cold condition for 16days 711bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.25296e-89
whv_1617042_g11r 2012 3' Shoot grown under cold condition for 16days 716bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 4.94084e-94
whv_1610090_g24f 2012 5' Shoot grown under cold condition for 16days 771bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.87679e-98
whv_1610090_g24r 2012 3' Shoot grown under cold condition for 16days 685bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.45481e-92
whv_165009_h01f 2012 5' Shoot grown under cold condition for 16days 788bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.03968e-98
whv_165009_h01r 2012 3' Shoot grown under cold condition for 16days 716bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.7745e-97
whv_163058_h16f 2012 5' Shoot grown under cold condition for 16days 779bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv_163058_h16r 2012 3' Shoot grown under cold condition for 16days 713bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.17395e-97
whv_166089_h21r 2012 3' Shoot grown under cold condition for 16days 189bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 4.35123e-28
whv_1616089_h22f 2012 5' Shoot grown under cold condition for 16days 651bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.96029e-97
whv_1616089_h22r 2012 3' Shoot grown under cold condition for 16days 647bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.10016e-87
whv_169090_h23f 2012 5' Shoot grown under cold condition for 16days 412bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 125 8.02518e-27
whv_1613090_h23r 2012 3' Shoot grown under cold condition for 16days 656bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.56054e-84
whv_169090_h23r 2012 3' Shoot grown under cold condition for 16days 353bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 139 4.16684e-31
whv_164023_i05f 2012 5' Shoot grown under cold condition for 16days 735bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.50287e-98
whv_164023_i05r 2012 3' Shoot grown under cold condition for 16days 688bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv_1616039_i10f 2012 5' Shoot grown under cold condition for 16days 691bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.61645e-97
whv_1616039_i10r 2012 3' Shoot grown under cold condition for 16days 622bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 8.94483e-85
whv_1614072_i20r 2012 3' Shoot grown under cold condition for 16days 151bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 116 2.23891e-24
whv_161007_j01f 2012 5' Shoot grown under cold condition for 16days 726bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_161007_j01r 2012 3' Shoot grown under cold condition for 16days 658bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.13093e-90
whv_1619008_j03f 2012 5' Shoot grown under cold condition for 16days 726bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1619008_j03r 2012 3' Shoot grown under cold condition for 16days 675bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.92229e-84
whv_165008_j04r 2012 3' Shoot grown under cold condition for 16days 214bp Contig11974       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 37 1.67824
whv_167023_j06f 2012 5' Shoot grown under cold condition for 16days 547bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 217 1.4562e-54
whv_167023_j06r 2012 3' Shoot grown under cold condition for 16days 542bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 245 5.01697e-63
whv_166071_j17f 2012 5' Shoot grown under cold condition for 16days 740bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_166071_j17r 2012 3' Shoot grown under cold condition for 16days 715bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.62473e-97
whv_162072_j20f 2012 5' Shoot grown under cold condition for 16days 221bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 7.2112e-31
whv_1619087_j21f 2012 5' Shoot grown under cold condition for 16days 769bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_1619087_j21r 2012 3' Shoot grown under cold condition for 16days 652bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.40245e-84
whv_1620088_j24f 2012 5' Shoot grown under cold condition for 16days 726bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.88222e-97
whv_1620088_j24r 2012 3' Shoot grown under cold condition for 16days 671bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 324 1.92416e-86
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