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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 54
First Previous 1-54 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsh_13081_a06f 2012 5' - 219bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.119971
whsh_13081_a06r 2012 3' - 206bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.117385
whsh_1033_a09f 2012 5' - 211bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000112684
whsh_1033_a09r 2012 3' - 210bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.59804e-12
whsh_6049_a10f 2012 5' - 260bp Contig6300       mCG1051063[Musmusculus] 41 0.119125
whsh_6049_a10r 2012 3' - 226bp Contig6300       mCG1051063[Musmusculus] 41 0.119168
whsh_3049_a16f 2012 5' - 362bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.12159e-28
whsh_3049_a16r 2012 3' - 371bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 132 3.94061e-29
whsh_17018_b02r 2012 3' - 99bp Contig6300            
whsh_16082_b12f 2012 5' - 459bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 161 5.92455e-38
whsh_16082_b12r 2012 3' - 464bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.53929e-44
whsh_7058_d04f 2012 5' - 130bp Contig6300            
whsh_7058_d04r 2012 3' - 77bp Contig6300            
whsh_13083_e06r 2012 3' - 79bp Contig6300            
whsh_15051_e16f 2012 5' - 313bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.115801
whsh_15051_e16r 2012 3' - 314bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 62 4.85397e-08
whsh_2019_e20f 2012 5' - 354bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.54384e-14
whsh_2019_e20r 2012 3' - 325bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.54265e-14
whsh_14083_e24r 2012 3' - 99bp Contig6300       RecName:Full=PutativeuncharacterizedproteinFLJ46204 37 2.19197
whsh_3020_f02f 2012 5' - 113bp Contig6300            
whsh_3020_f02r 2012 3' - 82bp Contig6300            
whsh_2020_f14f 2012 5' - 577bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 300 2.04709e-79
whsh_2020_f14r 2012 3' - 515bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 222 2.92763e-56
whsh_11036_f21f 2012 5' - 218bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.000425352
whsh_18075_g11r 2012 3' - 84bp Contig6300            
whsh_17043_g15r 2012 3' - 93bp Contig6300            
whsh_17075_g17r 2012 3' - 131bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 39 0.582045
whsh_9059_g22r 2012 3' - 200bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.65367e-12
whsh_9059_g22f 2012 5' - 249bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.56747e-12
whsh_10076_h17f 2012 5' - 580bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.93207e-97
whsh_10076_h17r 2012 3' - 512bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.31033e-56
whsh_10092_h18f 2012 5' - 410bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.49347e-44
whsh_10092_h18r 2012 3' - 359bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 193 1.41448e-47
whsh_17044_h21r 2012 3' - 156bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 39 0.591447
whsh_13053_i16f 2012 5' - 111bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 35 6.55375
whsh_13053_i16r 2012 3' - 109bp Contig6300            
whsh_17069_i17f 2012 5' - 271bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.117464
whsh_17069_i17r 2012 3' - 255bp Contig6300       mCG1051063[Musmusculus] 41 0.119956
whsh_9005_i19r 2012 3' - 97bp Contig6300            
whsh_9005_i19f 2012 5' - 135bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 39 0.34018
whsh_5038_j15r 2012 3' - 77bp Contig6300            
whsh_6077_k05r 2012 3' - 90bp Contig6300            
whsh_16093_k06r 2012 3' - 142bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 39 0.337038
whsh_8093_k12r 2012 3' - 197bp Contig6300       mCG1051063[Musmusculus] 41 0.118548
whsh_15015_o01r 2012 3' - 252bp Contig6300       mCG1051063[Musmusculus] 41 0.115957
whsh_16047_o21f 2012 5' - 104bp Contig6300            
whsh_16047_o21r 2012 3' - 61bp Contig6300            
whsh_5048_p09f 2012 5' - 331bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 6.01149e-06
whsh_5048_p09r 2012 3' - 317bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 65 5.91878e-09
whsh_5064_p10r 2012 3' - 54bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.105374
whsh_4048_p15f 2012 5' - 338bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 73 2.76494e-11
whsh_6048_p15f 2012 5' - 164bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 40 0.201365
whsh_4048_p15r 2012 3' - 314bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 73 2.74986e-11
whsh_6048_p15r 2012 3' - 152bp Contig6300       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.156132
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