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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 140
First Previous 1-100 101-140 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsh_17049_a04f 2012 5' - 528bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 334 9.63106e-90
whsh_17049_a04r 2012 3' - 528bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 341 7.87871e-92
whsh_9018_b02r 2012 3' - 59bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial[Tradescantiaohiensis] 44 0.00815593
whsh_1034_b21f 2012 5' - 501bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 306 1.48018e-81
whsh_1034_b21r 2012 3' - 494bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 321 4.50845e-86
whsh_5050_b22f 2012 5' - 205bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 104 1.47949e-20
whsh_5050_b22r 2012 3' - 209bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 123 2.34107e-26
whsh_17066_b23f 2012 5' - 367bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 235 3.22055e-60
whsh_17066_b23r 2012 3' - 372bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Castelliatuberculosa] 257 8.12193e-67
whsh_16073_c05f 2012 5' - 570bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 394 9.88681e-108
whsh_16073_c05r 2012 3' - 593bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 392 3.28757e-107
whsh_5057_c10f 2012 5' - 167bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 104 1.4783e-20
whsh_5057_c10r 2012 3' - 143bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial[Streptochaetaangustifolia] 98 7.98494e-19
whsh_6057_c16f 2012 5' - 207bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 104 1.46976e-20
whsh_6057_c16r 2012 3' - 196bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 114 1.10188e-23
whsh_1041_c21r 2012 3' - 127bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial[Streptochaetaangustifolia] 86 3.19852e-15
whsh_6057_c22f 2012 5' - 126bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 51 0.000148922
whsh_9089_c24r 2012 3' - 134bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 73 2.7764e-11
whsh_9089_c24f 2012 5' - 144bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 63 3.86075e-08
whsh_7026_d02f 2012 5' - 342bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Eremopyrumorientale] 200 1.1439e-49
whsh_9058_d04r 2012 3' - 399bp Contig17539       ribulosebiphosphatecarboxylase,partial[Leersiaoryzoides] 256 1.79656e-66
whsh_18074_d05f 2012 5' - 345bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 202 5.27496e-50
whsh_18074_d05r 2012 3' - 323bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Castelliatuberculosa] 200 1.17011e-49
whsh_14090_d06r 2012 3' - 96bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 52 5.0416e-05
whsh_5010_d07r 2012 3' - 268bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 166 3.17314e-39
whsh_2090_d12f 2012 5' - 582bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 376 1.75012e-102
whsh_2090_d12r 2012 3' - 635bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 423 2.67163e-116
whsh_4010_d13f 2012 5' - 496bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 333 1.94664e-89
whsh_4010_d13r 2012 3' - 258bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 164 1.22279e-38
whsh_4074_d17f 2012 5' - 198bp Contig17539       ribulosebiphosphatecarboxylase,partial[Spartinaversicolor] 140 2.44904e-31
whsh_17058_d22r 2012 3' - 102bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 51 0.000146251
whsh_10003_e01f 2012 5' - 213bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 119 4.40044e-25
whsh_10003_e01r 2012 3' - 171bp Contig17539       rbcLgeneproduct[Leersiatisserantii] 113 1.8598e-23
whsh_3019_e08f 2012 5' - 196bp Contig17539            
whsh_3019_e08r 2012 3' - 163bp Contig17539            
whsh_9020_f02f 2012 5' - 160bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 76 3.32193e-12
whsh_1036_f03f 2012 5' - 422bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 291 8.62505e-77
whsh_3036_f03f 2012 5' - 290bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 161 6.05306e-38
whsh_1036_f03r 2012 3' - 594bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 411 8.93216e-113
whsh_3036_f03r 2012 3' - 276bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 170 1.67069e-40
whsh_9004_f13r 2012 3' - 119bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial[Streptochaetaangustifolia] 86 3.21803e-15
whsh_18068_f17r 2012 3' - 68bp Contig17539            
whsh_6086_f24f 2012 5' - 261bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 153 2.80919e-35
whsh_6084_f24r 2012 3' - 227bp Contig17539       rbcLgeneproduct[Leersiatisserantii] 156 2.54173e-36
whsh_11011_g07f 2012 5' - 429bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 270 1.19117e-70
whsh_11011_g07r 2012 3' - 385bp Contig17539       rbcLgeneproduct[Leersiatisserantii] 254 8.80298e-66
whsh_7059_g10f 2012 5' - 193bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 94 1.54615e-17
whsh_16027_g14f 2012 5' - 595bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 407 1.003e-111
whsh_16027_g14r 2012 3' - 636bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 423 2.67163e-116
whsh_1043_g15f 2012 5' - 241bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 130 1.9178e-28
whsh_2043_g15f 2012 5' - 118bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 49 0.00043594
whsh_10075_g23f 2012 5' - 195bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 96 3.10524e-18
whsh_11075_g23f 2012 5' - 191bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 104 1.49897e-20
whsh_10075_g23r 2012 3' - 167bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 96 3.08245e-18
whsh_11075_g23r 2012 3' - 189bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 121 1.1888e-25
whsh_5077_h05f 2012 5' - 575bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Hordeummarinumsubsp.marinum] 368 1.90371e-100
whsh_5076_h05r 2012 3' - 649bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 430 2.30056e-118
whsh_1037_i09r 2012 3' - 235bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 139 4.15687e-31
whsh_15037_i15f 2012 5' - 559bp Contig17539       ribulose-bisphosphatecarboxylase,partial[Panicumbisulcatum] 387 8.96581e-106
whsh_1005_i19f 2012 5' - 486bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 336 2.34192e-90
whsh_4085_i24f 2012 5' - 267bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 146 3.39809e-33
whsh_4085_i24r 2012 3' - 261bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 161 6.04754e-38
whsh_10006_j01f 2012 5' - 222bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 101 7.47975e-20
whsh_2006_j01f 2012 5' - 373bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 221 6.45034e-56
whsh_10006_j01r 2012 3' - 196bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 101 7.39098e-20
whsh_2006_j01r 2012 3' - 376bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 242 3.5034e-62
whsh_11022_j02f 2012 5' - 196bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 96 3.10524e-18
whsh_5038_j03f 2012 5' - 603bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 410 2.07323e-112
whsh_5038_j03r 2012 3' - 650bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 427 1.97188e-117
whsh_3022_j08f 2012 5' - 485bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 306 1.52151e-81
whsh_3022_j08r 2012 3' - 491bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 317 1.11557e-84
whsh_16086_j12r 2012 3' - 230bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 133 2.99929e-29
whsh_8006_j13r 2012 3' - 261bp Contig17539       ribulosebiphosphatecarboxylase,partial[Poaannua] 182 3.31071e-44
whsh_3054_j16f 2012 5' - 252bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 133 3.02931e-29
whsh_3054_j16r 2012 3' - 247bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 151 7.98367e-35
whsh_9006_j19r 2012 3' - 167bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 96 3.08245e-18
whsh_9054_j22r 2012 3' - 634bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 435 3.93057e-120
whsh_9054_j22f 2012 5' - 596bp Contig17539       ribulose1,5biphosphatecarboxylase/oxygenase[TriticumaestivumxSecalecereale] 419 3.3312e-115
whsh_16070_j23r 2012 3' - 40bp Contig17539            
whsh_11045_k03f 2012 5' - 252bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 133 3.02931e-29
whsh_11045_k03r 2012 3' - 236bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 139 4.15687e-31
whsh_1093_k12f 2012 5' - 161bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 76 3.32193e-12
whsh_1093_k12r 2012 3' - 151bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 96 3.1314e-18
whsh_8013_k13r 2012 3' - 162bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial[Streptochaetaangustifolia] 93 3.42969e-17
whsh_12013_k19f 2012 5' - 407bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 279 2.56708e-73
whsh_12013_k19r 2012 3' - 321bp Contig17539       ribulosebiphosphatecarboxylase,partial[Poaannua] 216 2.70134e-54
whsh_15061_k22f 2012 5' - 491bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 344 6.52492e-93
whsh_15061_k22r 2012 3' - 595bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 392 3.33894e-107
whsh_2077_k23r 2012 3' - 98bp Contig17539       ribulosebiphosphatecarboxylase,partial[Poaannua] 68 6.79814e-10
whsh_5077_k23r 2012 3' - 85bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 49 0.00043188
whsh_14030_l02f 2012 5' - 328bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 187 1.73544e-45
whsh_14030_l02r 2012 3' - 324bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 206 2.78505e-51
whsh_16094_l06r 2012 3' - 65bp Contig17539            
whsh_13078_l11r 2012 3' - 98bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 49 0.000426797
whsh_12078_l17f 2012 5' - 596bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 409 3.44725e-112
whsh_12078_l17r 2012 3' - 628bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 414 9.42223e-114
whsh_8014_l19r 2012 3' - 110bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 54 1.36748e-05
whsh_3046_l21r 2012 3' - 143bp Contig17539       RecName:Full=Ribulosebisphosphatecarboxylaselargechain;Short=RuBisCOlargesubunit;Flags:Precursor 70 1.78299e-10
whsh_17062_l22f 2012 5' - 606bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 418 7.72666e-115
whsh_17062_l22r 2012 3' - 629bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 414 9.42223e-114
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