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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 14
First Previous 1-14 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_1025_g05r 2012 3' Dormant seed with water absorption after breaking 640bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 1.55133e-79
whf_12068_f17r 2012 3' Spike at flowering date 381bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.19454e-62
whh_13013_k19r 2012 3' Spike at heading date 457bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 5.35853e-39
whr_19079_l05r 2012 3' Root 578bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 248 9.2317e-64
whrd_13080_b19r 2012 3' Root of dessiccated seed 585bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.91872e-72
whv_1618031_a05f 2012 5' Shoot grown under cold condition for 16days 566bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.21999e-89
whv_1618031_a06r 2012 3' Shoot grown under cold condition for 16days 251bp Contig1949       PREDICTED:succinyl-CoAligase[ADP-forming]subunitbeta,mitochondrial-like[Brachypodiumdistachyon] 164 1.18613e-38
whv_163046_d11r 2012 3' Shoot grown under cold condition for 16days 731bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.54439e-97
whvd_9017_o05f 2012 5' Shoot grown with dessication 696bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.51807e-92
whxc_8090_h24f 2012 5' Root, treated at 50 microM Al for 6h 282bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.60299e-43
HX022264 whxk_12078_d19r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 487bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 2.9766e-53
HX048118 whxm_2068_m19r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 378bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 134 1.02475e-29
HX126859 whxr_16095_b22r 2012 3' Roots, 18 day old plants were grown hydroponically 780bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 1.07986e-103
HX127318 whxr_19030_c07r 2012 3' Roots, 18 day old plants were grown hydroponically 756bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 3.72522e-91
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