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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 61
First Previous 1-61 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1615031_b06f 2012 5' Shoot grown under cold condition for 16days 569bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 372 3.08054e-101
whv_1615031_b06r 2012 3' Shoot grown under cold condition for 16days 355bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 140 1.42659e-31
whv_1619063_b13f 2012 5' Shoot grown under cold condition for 16days 651bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 425 7.58566e-117
whv_1619063_b13r 2012 3' Shoot grown under cold condition for 16days 461bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.10727e-52
whv_164029_c06f 2012 5' Shoot grown under cold condition for 16days 618bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 400 1.35165e-109
whv_164029_c06r 2012 3' Shoot grown under cold condition for 16days 643bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.67509e-89
whv_1613030_c07f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 423 1.64869e-116
whv_1613030_c07r 2012 3' Shoot grown under cold condition for 16days 352bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 137 1.5834e-30
whv_162077_c18r 2012 3' Shoot grown under cold condition for 16days 59bp Contig6670            
whv_168078_c20f 2012 5' Shoot grown under cold condition for 16days 570bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 375 6.31793e-102
whv_168078_c20r 2012 3' Shoot grown under cold condition for 16days 666bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.86837e-89
whv_162030_d08f 2012 5' Shoot grown under cold condition for 16days 637bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 420 1.34336e-115
whv_162030_d08r 2012 3' Shoot grown under cold condition for 16days 469bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33741e-53
whv_167094_d23f 2012 5' Shoot grown under cold condition for 16days 656bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 427 1.5471e-117
whv_167094_d23r 2012 3' Shoot grown under cold condition for 16days 666bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.83616e-106
whv_165011_e02r 2012 3' Shoot grown under cold condition for 16days 503bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 2.45684e-60
whv_1618027_e06f 2012 5' Shoot grown under cold condition for 16days 533bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 349 2.31587e-94
whv_166027_e06f 2012 5' Shoot grown under cold condition for 16days 647bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 420 1.3957e-115
whv_1618027_e06r 2012 3' Shoot grown under cold condition for 16days 409bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31909e-53
whv_166027_e06r 2012 3' Shoot grown under cold condition for 16days 630bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 403 1.66318e-110
whv_1617028_e07f 2012 5' Shoot grown under cold condition for 16days 580bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 370 2.13938e-100
whv_1617028_e07r 2012 3' Shoot grown under cold condition for 16days 419bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 9.33991e-47
whv_162028_e08f 2012 5' Shoot grown under cold condition for 16days 634bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 409 3.93969e-112
whv_162028_e08r 2012 3' Shoot grown under cold condition for 16days 420bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 5.12498e-45
whv_164059_e13f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 420 1.37825e-115
whv_164059_e13r 2012 3' Shoot grown under cold condition for 16days 547bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 5.77582e-91
whv_163060_e15f 2012 5' Shoot grown under cold condition for 16days 713bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 460 1.96775e-127
whv_163060_e15r 2012 3' Shoot grown under cold condition for 16days 670bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 375 9.55125e-102
whv_1614059_f14f 2012 5' Shoot grown under cold condition for 16days 667bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 438 9.18699e-121
whv_1614059_f14r 2012 3' Shoot grown under cold condition for 16days 422bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 3.20412e-39
whv_1620076_f19f 2012 5' Shoot grown under cold condition for 16days 612bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 397 1.09656e-108
whv_1620076_f19r 2012 3' Shoot grown under cold condition for 16days 356bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 140 1.42659e-31
whv_163090_g23f 2012 5' Shoot grown under cold condition for 16days 568bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 371 9.00572e-101
whv_163090_g24r 2012 3' Shoot grown under cold condition for 16days 40bp Contig6670            
whv_165010_h04f 2012 5' Shoot grown under cold condition for 16days 713bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 458 9.76586e-127
whv_165010_h04r 2012 3' Shoot grown under cold condition for 16days 653bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.59275e-90
whv_1615024_i07f 2012 5' Shoot grown under cold condition for 16days 602bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 408 4.54973e-112
whv_1615024_i07r 2012 3' Shoot grown under cold condition for 16days 356bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 140 1.42659e-31
whv_164071_i17f 2012 5' Shoot grown under cold condition for 16days 669bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 430 1.45967e-118
whv_164071_i17r 2012 3' Shoot grown under cold condition for 16days 675bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 6.74959e-95
whv_165087_j22f 2012 5' Shoot grown under cold condition for 16days 642bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 411 1.07823e-112
whv_162088_j24f 2012 5' Shoot grown under cold condition for 16days 671bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 430 2.48982e-118
whv_162088_j24r 2012 3' Shoot grown under cold condition for 16days 423bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.25125e-59
whv_168006_k04f 2012 5' Shoot grown under cold condition for 16days 589bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 386 3.02899e-105
whv_168006_k04r 2012 3' Shoot grown under cold condition for 16days 572bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 7.49784e-87
whv_1613069_l18f 2012 5' Shoot grown under cold condition for 16days 277bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 190 1.55456e-46
whv_166086_l23f 2012 5' Shoot grown under cold condition for 16days 125bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 5.45585e-15
whv_161020_m08f 2012 5' Shoot grown under cold condition for 16days 599bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 388 4.79844e-106
whv_161020_m08r 2012 3' Shoot grown under cold condition for 16days 411bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31909e-53
whv_161068_n19f 2012 5' Shoot grown under cold condition for 16days 671bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 438 9.14279e-121
whv_161068_n19r 2012 3' Shoot grown under cold condition for 16days 543bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 278 5.34776e-73
whv_1620001_o02f 2012 5' Shoot grown under cold condition for 16days 634bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 407 1.16156e-111
whv_1620001_o02r 2012 3' Shoot grown under cold condition for 16days 320bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 120 2.01734e-25
whv_1610050_o16f 2012 5' Shoot grown under cold condition for 16days 665bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 425 4.66406e-117
whv_1610050_o16r 2012 3' Shoot grown under cold condition for 16days 608bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 1.9786e-94
whv_1614081_o22f 2012 5' Shoot grown under cold condition for 16days 660bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 428 9.17922e-118
whv_1614081_o22r 2012 3' Shoot grown under cold condition for 16days 355bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 139 4.15074e-31
whv_1614082_o23f 2012 5' Shoot grown under cold condition for 16days 514bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 334 5.15719e-90
whv_1614082_o23r 2012 3' Shoot grown under cold condition for 16days 334bp Contig6670       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 3.14621e-39
whv_1615001_p01f 2012 5' Shoot grown under cold condition for 16days 275bp Contig6670       unnamedproteinproduct[Oikopleuradioica] 38 0.990875
whv_1615001_p01r 2012 3' Shoot grown under cold condition for 16days 269bp Contig6670       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-like[Brachypodiumdistachyon] 59 4.18288e-07
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