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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 131
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxf_36016_a04f 2012 5' Seedling, infected with leaf rust 95bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 62 4.88638e-08
whxf_1047_a10r 2012 3' Seedling, infected with leaf rust 53bp Contig6477            
whxf_11079_a18f 2012 5' Seedling, infected with leaf rust 677bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whxf_23080_a20f 2012 5' Seedling, infected with leaf rust 659bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 275 9.94458e-72
whxf_24080_a20f 2012 5' Seedling, infected with leaf rust 669bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 278 9.27091e-73
whxf_23080_a20r 2012 3' Seedling, infected with leaf rust 378bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 100 2.14169e-19
whxf_24080_a20r 2012 3' Seedling, infected with leaf rust 331bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.61355e-12
whxf_21015_b02f 2012 5' Seedling, infected with leaf rust 580bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.17701e-97
whxf_22015_b02f 2012 5' Seedling, infected with leaf rust 413bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 283 1.34997e-74
whxf_21015_b02r 2012 3' Seedling, infected with leaf rust 363bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.93768e-22
whxf_22015_b02r 2012 3' Seedling, infected with leaf rust 343bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 5.73001e-17
whxf_1031_b05f 2012 5' Seedling, infected with leaf rust 53bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0473004
whxf_1031_b05r 2012 3' Seedling, infected with leaf rust 514bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 215 3.57878e-54
whxf_24047_b10f 2012 5' Seedling, infected with leaf rust 603bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.39942e-97
whxf_24047_b10r 2012 3' Seedling, infected with leaf rust 371bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 158 5.13467e-37
whxf_5064_b15f 2012 5' Seedling, infected with leaf rust 447bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 311 6.15236e-83
whxf_5064_b15r 2012 3' Seedling, infected with leaf rust 450bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.53888e-52
whxf_20064_b16f 2012 5' Seedling, infected with leaf rust 616bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.57058e-97
whxf_8080_b19f 2012 5' Seedling, infected with leaf rust 659bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 1.172e-80
whxf_6095_b21f 2012 5' Seedling, infected with leaf rust 695bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whxf_6095_b21r 2012 3' Seedling, infected with leaf rust 457bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.25006e-52
whxf_31095_b22f 2012 5' Seedling, infected with leaf rust 343bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.4343e-56
whxf_37013_c01f 2012 5' Seedling, infected with leaf rust 691bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whxf_25014_c04f 2012 5' Seedling, infected with leaf rust 77bp Contig6477            
whxf_8046_c11f 2012 5' Seedling, infected with leaf rust 690bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_8046_c11r 2012 3' Seedling, infected with leaf rust 511bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.50824e-52
whxf_17061_c13f 2012 5' Seedling, infected with leaf rust 643bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 346 3.30338e-93
whxf_17061_c13r 2012 3' Seedling, infected with leaf rust 559bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 2.53255e-92
whxf_29062_c16f 2012 5' Seedling, infected with leaf rust 608bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 3.98674e-95
whxf_29062_c16r 2012 3' Seedling, infected with leaf rust 555bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 239 2.96358e-61
whxf_25094_c23r 2012 3' Seedling, infected with leaf rust 375bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 3.0004e-21
whxf_21029_d06f 2012 5' Seedling, infected with leaf rust 640bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.5783e-98
whxf_22029_d06f 2012 5' Seedling, infected with leaf rust 637bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.51219e-98
whxf_23029_d06f 2012 5' Seedling, infected with leaf rust 276bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 126 2.11834e-27
whxf_21029_d06r 2012 3' Seedling, infected with leaf rust 382bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 156 3.27575e-36
whxf_22029_d06r 2012 3' Seedling, infected with leaf rust 413bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 171 9.76471e-41
whxf_36045_d10f 2012 5' Seedling, infected with leaf rust 202bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 71 8.13711e-11
whxf_39046_d11f 2012 5' Seedling, infected with leaf rust 73bp Contig6477            
whxf_39094_d23f 2012 5' Seedling, infected with leaf rust 659bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 354 1.2898e-95
whxf_3094_d24f 2012 5' Seedling, infected with leaf rust 51bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 5.44196
whxf_39094_d24f 2012 5' Seedling, infected with leaf rust 64bp Contig6477       ChainS,StructureOfRiceRubiscoInComplexWith6pg 49 0.000365982
whxf_24027_e06f 2012 5' Seedling, infected with leaf rust 605bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 9.39304e-81
whxf_25027_e06f 2012 5' Seedling, infected with leaf rust 607bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 4.66172e-80
whxf_24027_e06r 2012 3' Seedling, infected with leaf rust 402bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.36472e-56
whxf_25027_e06r 2012 3' Seedling, infected with leaf rust 384bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.26059e-52
whxf_35043_e10f 2012 5' Seedling, infected with leaf rust 413bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 123 2.33497e-26
whxf_36043_e10f 2012 5' Seedling, infected with leaf rust 405bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 118 5.79899e-25
whxf_37043_e10f 2012 5' Seedling, infected with leaf rust 395bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 118 5.8945e-25
whxf_8060_e15f 2012 5' Seedling, infected with leaf rust 683bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whxf_8060_e15r 2012 3' Seedling, infected with leaf rust 513bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 3.46728e-78
whxf_9060_e15r 2012 3' Seedling, infected with leaf rust 380bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.27364e-52
whxf_32060_e16f 2012 5' Seedling, infected with leaf rust 639bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whxf_2012_f04f 2012 5' Seedling, infected with leaf rust 462bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.42715e-49
whxf_2012_f04r 2012 3' Seedling, infected with leaf rust 468bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 235 4.29232e-60
whxf_29044_f12f 2012 5' Seedling, infected with leaf rust 629bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.49107e-98
whxf_29044_f12r 2012 3' Seedling, infected with leaf rust 588bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 292 4.48549e-77
whxf_2060_f15f 2012 5' Seedling, infected with leaf rust 471bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 7.56063e-49
whxf_2060_f15r 2012 3' Seedling, infected with leaf rust 476bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 235 4.23531e-60
whxf_40075_f17f 2012 5' Seedling, infected with leaf rust 212bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000112684
whxf_5009_g01f 2012 5' Seedling, infected with leaf rust 706bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whxf_6009_g01f 2012 5' Seedling, infected with leaf rust 690bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_5009_g01r 2012 3' Seedling, infected with leaf rust 460bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.23586e-52
whxf_6009_g01r 2012 3' Seedling, infected with leaf rust 451bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.27847e-52
whxf_18041_g10f 2012 5' Seedling, infected with leaf rust 647bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whxf_24042_g12f 2012 5' Seedling, infected with leaf rust 689bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_25057_g14f 2012 5' Seedling, infected with leaf rust 624bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.97209e-97
whxf_25057_g14r 2012 3' Seedling, infected with leaf rust 531bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 1.28943e-81
whxf_17009_h01r 2012 3' Seedling, infected with leaf rust 237bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00164605
whxf_2026_h07f 2012 5' Seedling, infected with leaf rust 706bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whxf_2026_h07r 2012 3' Seedling, infected with leaf rust 582bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 290 1.6495e-76
whxf_29041_h10f 2012 5' Seedling, infected with leaf rust 569bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.8689e-98
whxf_29041_h10r 2012 3' Seedling, infected with leaf rust 514bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.34964e-52
whxf_18057_h14f 2012 5' Seedling, infected with leaf rust 630bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.7542e-97
whxf_18057_h14r 2012 3' Seedling, infected with leaf rust 619bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.51003e-97
whxf_6058_h16f 2012 5' Seedling, infected with leaf rust 648bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.73549e-97
whxf_6058_h16r 2012 3' Seedling, infected with leaf rust 586bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 292 3.37902e-77
whxf_23073_h18f 2012 5' Seedling, infected with leaf rust 46bp Contig6477            
whxf_5089_h21f 2012 5' Seedling, infected with leaf rust 684bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whxf_32089_h22f 2012 5' Seedling, infected with leaf rust 392bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 1.87985e-68
whxf_12008_i04f 2012 5' Seedling, infected with leaf rust 668bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.0928e-97
whxf_38024_i08f 2012 5' Seedling, infected with leaf rust 689bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_37023_j05f 2012 5' Seedling, infected with leaf rust 647bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 7.69407e-98
whxf_17023_j06r 2012 3' Seedling, infected with leaf rust 608bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 291 1.09074e-76
whxf_17024_j08f 2012 5' Seedling, infected with leaf rust 681bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whxf_17024_j08r 2012 3' Seedling, infected with leaf rust 588bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.06762e-78
whxf_14055_j14f 2012 5' Seedling, infected with leaf rust 620bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.39142e-98
whxf_14055_j14r 2012 3' Seedling, infected with leaf rust 399bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 208 4.31354e-52
whxf_29072_j19f 2012 5' Seedling, infected with leaf rust 47bp Contig6477            
whxf_21038_k12f 2012 5' Seedling, infected with leaf rust 675bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.89486e-98
whxf_21038_k12r 2012 3' Seedling, infected with leaf rust 401bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 153 1.64006e-35
whxf_13054_k15f 2012 5' Seedling, infected with leaf rust 689bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_13054_k15r 2012 3' Seedling, infected with leaf rust 602bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.13108e-78
whxf_1054_k16r 2012 3' Seedling, infected with leaf rust 579bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 287 1.37311e-75
whxf_1005_l02f 2012 5' Seedling, infected with leaf rust 603bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 348 9.53088e-94
whxf_1005_l02r 2012 3' Seedling, infected with leaf rust 516bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 294 6.06215e-78
whxf_35006_l03f 2012 5' Seedling, infected with leaf rust 681bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whxf_5035_m10f 2012 5' Seedling, infected with leaf rust 683bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whxf_5035_m10r 2012 3' Seedling, infected with leaf rust 485bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 188 4.62384e-46
whxf_24036_m12f 2012 5' Seedling, infected with leaf rust 574bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.76767e-97
whxf_24036_m12r 2012 3' Seedling, infected with leaf rust 387bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 171 9.80079e-41
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