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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 89
First Previous 1-89 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1620015_a02f 2012 5' Shoot grown under cold condition for 16days 508bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.51976e-44
whv_1620015_a02r 2012 3' Shoot grown under cold condition for 16days 498bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 205 3.57245e-51
whv_167016_a03f 2012 5' Shoot grown under cold condition for 16days 778bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv_167016_a03r 2012 3' Shoot grown under cold condition for 16days 636bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.00724e-84
whv_167047_a10f 2012 5' Shoot grown under cold condition for 16days 746bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv_167047_a10r 2012 3' Shoot grown under cold condition for 16days 743bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.19995e-97
whv_161030_c08f 2012 5' Shoot grown under cold condition for 16days 650bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 1.92326e-88
whv_161030_c08r 2012 3' Shoot grown under cold condition for 16days 673bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.27294e-87
whv_1613061_c14f 2012 5' Shoot grown under cold condition for 16days 709bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_1613061_c14r 2012 3' Shoot grown under cold condition for 16days 675bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.52151e-97
whv_161078_c19f 2012 5' Shoot grown under cold condition for 16days 299bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 205 6.16763e-51
whv_1614093_c21f 2012 5' Shoot grown under cold condition for 16days 753bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 354 1.7336e-95
whv_1614093_c21r 2012 3' Shoot grown under cold condition for 16days 669bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.28392e-87
whv_165030_d08f 2012 5' Shoot grown under cold condition for 16days 713bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whv_165030_d08r 2012 3' Shoot grown under cold condition for 16days 666bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.18167e-90
whv_1612011_e01f 2012 5' Shoot grown under cold condition for 16days 693bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_1612011_e01r 2012 3' Shoot grown under cold condition for 16days 699bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 346 3.99492e-93
whv_166012_e03f 2012 5' Shoot grown under cold condition for 16days 746bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv_168012_e03f 2012 5' Shoot grown under cold condition for 16days 709bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_166012_e03r 2012 3' Shoot grown under cold condition for 16days 738bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv_168012_e03r 2012 3' Shoot grown under cold condition for 16days 662bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.1563e-90
whv_1612011_f01f 2012 5' Shoot grown under cold condition for 16days 742bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.60108e-98
whv_1612011_f01r 2012 3' Shoot grown under cold condition for 16days 629bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.97837e-87
whv_165027_f06f 2012 5' Shoot grown under cold condition for 16days 738bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv_165027_f06r 2012 3' Shoot grown under cold condition for 16days 683bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.47327e-94
whv_1618075_f17f 2012 5' Shoot grown under cold condition for 16days 644bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whv_1618075_f17r 2012 3' Shoot grown under cold condition for 16days 658bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.17892e-87
whv_1616009_g02r 2012 3' Shoot grown under cold condition for 16days 55bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.105374
whv_1613025_g06f 2012 5' Shoot grown under cold condition for 16days 710bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whv_1616025_g06f 2012 5' Shoot grown under cold condition for 16days 676bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.13029e-97
whv_1613025_g06r 2012 3' Shoot grown under cold condition for 16days 620bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 292 5.18413e-77
whv_1616025_g06r 2012 3' Shoot grown under cold condition for 16days 620bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.23391e-78
whv_1617042_g12r 2012 3' Shoot grown under cold condition for 16days 55bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.0806823
whv_163058_g15f 2012 5' Shoot grown under cold condition for 16days 498bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 251 5.70341e-65
whv_163058_g15r 2012 3' Shoot grown under cold condition for 16days 465bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 265 3.87325e-69
whv_1611058_g16f 2012 5' Shoot grown under cold condition for 16days 696bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv_1611058_g16r 2012 3' Shoot grown under cold condition for 16days 634bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 3.18531e-85
whv_1610073_g17f 2012 5' Shoot grown under cold condition for 16days 688bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 1.29132e-80
whv_1610073_g17r 2012 3' Shoot grown under cold condition for 16days 663bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.38407e-89
whv_1610073_g18f 2012 5' Shoot grown under cold condition for 16days 588bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 8.87455e-81
whv_1610073_g18r 2012 3' Shoot grown under cold condition for 16days 655bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 3.36159e-88
whv_1617009_h01f 2012 5' Shoot grown under cold condition for 16days 652bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv_1617009_h01r 2012 3' Shoot grown under cold condition for 16days 697bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.42363e-90
whv_1618010_h04r 2012 3' Shoot grown under cold condition for 16days 613bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.8201e-87
whv_165025_h05r 2012 3' Shoot grown under cold condition for 16days 53bp Contig7252       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 42 0.0473004
whv_1616042_h12r 2012 3' Shoot grown under cold condition for 16days 122bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 7.14729e-15
whv_1616090_h23r 2012 3' Shoot grown under cold condition for 16days 116bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.56874e-14
whv_168007_i01f 2012 5' Shoot grown under cold condition for 16days 679bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv_168007_i01r 2012 3' Shoot grown under cold condition for 16days 673bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_164087_i22f 2012 5' Shoot grown under cold condition for 16days 768bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_164087_i22r 2012 3' Shoot grown under cold condition for 16days 697bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv_169088_i24f 2012 5' Shoot grown under cold condition for 16days 715bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv_169088_i24r 2012 3' Shoot grown under cold condition for 16days 684bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.23286e-92
whv_165008_j04f 2012 5' Shoot grown under cold condition for 16days 266bp Contig7252       PREDICTED:hypotheticalproteinLOC100565328[Anoliscarolinensis] 35 8.47755
whv_1613006_k03f 2012 5' Shoot grown under cold condition for 16days 755bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1613006_k03r 2012 3' Shoot grown under cold condition for 16days 661bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.01876e-89
whv_1613006_k04f 2012 5' Shoot grown under cold condition for 16days 77bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 63 2.23247e-08
whv_1611005_l02f 2012 5' Shoot grown under cold condition for 16days 625bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.42464e-98
whv_1611005_l02r 2012 3' Shoot grown under cold condition for 16days 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv_1614038_l12f 2012 5' Shoot grown under cold condition for 16days 755bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1614038_l12r 2012 3' Shoot grown under cold condition for 16days 686bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 6.32518e-88
whv_1612020_m07r 2012 3' Shoot grown under cold condition for 16days 49bp Contig7252       PREDICTED:ribulosebisphosphatecarboxylasesmallchainA,chloroplastic-like[Brachypodiumdistachyon] 40 0.129528
whv_162051_m14f 2012 5' Shoot grown under cold condition for 16days 705bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv_162051_m14r 2012 3' Shoot grown under cold condition for 16days 685bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whv_1614003_n02f 2012 5' Shoot grown under cold condition for 16days 713bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whv_1614003_n02r 2012 3' Shoot grown under cold condition for 16days 644bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.07391e-87
whv_1614067_n18f 2012 5' Shoot grown under cold condition for 16days 671bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.16427e-97
whv_169001_o01f 2012 5' Shoot grown under cold condition for 16days 647bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whv_169001_o01r 2012 3' Shoot grown under cold condition for 16days 723bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.67347e-97
whv_169001_o02f 2012 5' Shoot grown under cold condition for 16days 646bp Contig7252       hypotheticalprotein[Secalecereale] 360 2.23863e-97
whv_169001_o02r 2012 3' Shoot grown under cold condition for 16days 628bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.1899e-85
whv_166034_o11f 2012 5' Shoot grown under cold condition for 16days 766bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_166034_o11r 2012 3' Shoot grown under cold condition for 16days 660bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.13093e-90
whv_166034_o12f 2012 5' Shoot grown under cold condition for 16days 402bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 201 8.95769e-50
whv_1614049_o13f 2012 5' Shoot grown under cold condition for 16days 716bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv_1614049_o13r 2012 3' Shoot grown under cold condition for 16days 685bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whv_161082_o23f 2012 5' Shoot grown under cold condition for 16days 695bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_1611082_o23f 2012 5' Shoot grown under cold condition for 16days 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_161082_o23r 2012 3' Shoot grown under cold condition for 16days 309bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.30842e-53
whv_1611082_o23r 2012 3' Shoot grown under cold condition for 16days 658bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.13093e-90
whv_1620082_o24f 2012 5' Shoot grown under cold condition for 16days 408bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 118 5.79899e-25
whv_1620082_o24r 2012 3' Shoot grown under cold condition for 16days 344bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 135 7.94939e-30
whv_1612033_p09f 2012 5' Shoot grown under cold condition for 16days 786bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.03968e-98
whv_1612033_p09r 2012 3' Shoot grown under cold condition for 16days 674bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv_1618034_p11f 2012 5' Shoot grown under cold condition for 16days 689bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.53542e-97
whv_1618034_p11r 2012 3' Shoot grown under cold condition for 16days 669bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_1618034_p12r 2012 3' Shoot grown under cold condition for 16days 47bp Contig7252            
whv_168049_p14f 2012 5' Shoot grown under cold condition for 16days 685bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whv_168049_p14r 2012 3' Shoot grown under cold condition for 16days 656bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
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