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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 8
First Previous 1-8 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxf_3014_d03f 2012 5' Seedling, infected with leaf rust 294bp Contig11545       hypotheticalprotein[MonosigabrevicollisMX1] 36 2.92626
whxf_3014_d03r 2012 3' Seedling, infected with leaf rust 258bp Contig11545       hypotheticalproteinH04402_01417[ClostridiumbotulinumH04402065] 35 8.56683
whxf_31058_g15f 2012 5' Seedling, infected with leaf rust 62bp Contig11545       PREDICTED:chlorophylla-bbindingprotein1B-21,chloroplastic-like[Brachypodiumdistachyon] 48 0.000594543
whxf_7053_l13f 2012 5' Seedling, infected with leaf rust 596bp Contig11545       RecName:Full=Chlorophylla-bbindingprotein1B-21,chloroplastic;AltName:Full=LHCItypeICAB-1B-21;AltName:Full=LHCI-730chlorophylla/bbindingprotein;AltName:Full=Light-harvestingcomplexI21kDaprotein;Flags:Precursor 421 8.76633e-116
whxf_7053_l13r 2012 3' Seedling, infected with leaf rust 507bp Contig11545       light-harvestingcomplexI,partial(chloroplast)[Hordeumvulgare] 199 3.39767e-49
whxf_39083_n21f 2012 5' Seedling, infected with leaf rust 584bp Contig11545       light-harvestingcomplexI,partial(chloroplast)[Hordeumvulgare] 195 5.62161e-48
whxf_12082_o24f 2012 5' Seedling, infected with leaf rust 481bp Contig11545       light-harvestingcomplexI,partial(chloroplast)[Hordeumvulgare] 186 2.93346e-45
whxf_12082_o24r 2012 3' Seedling, infected with leaf rust 454bp Contig11545       light-harvestingcomplexI,partial(chloroplast)[Hordeumvulgare] 212 5.03604e-53
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