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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 109
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_7031_b05f 2012 5' Shoot grown under continuous light 360bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.59226e-12
whkp_7031_b05r 2012 3' Shoot grown under continuous light 333bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 8.36891e-16
whkp_17031_b06f 2012 5' Shoot grown under continuous light 695bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkp_17079_b18f 2012 5' Shoot grown under continuous light 73bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 8.14403e-08
whkp_8080_b20f 2012 5' Shoot grown under continuous light 687bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whkp_8080_b20r 2012 3' Shoot grown under continuous light 680bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.14084e-92
whkp_18029_c06f 2012 5' Shoot grown under continuous light 683bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whkp_18029_c06r 2012 3' Shoot grown under continuous light 683bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whkp_5077_c17f 2012 5' Shoot grown under continuous light 709bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whkp_5077_c17r 2012 3' Shoot grown under continuous light 684bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whkp_8014_d03f 2012 5' Shoot grown under continuous light 698bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whkp_8014_d03r 2012 3' Shoot grown under continuous light 698bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.4169e-92
whkp_1014_d04f 2012 5' Shoot grown under continuous light 746bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whkp_1014_d04r 2012 3' Shoot grown under continuous light 666bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.18167e-90
whkp_11029_d05f 2012 5' Shoot grown under continuous light 740bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whkp_11029_d05r 2012 3' Shoot grown under continuous light 676bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.55604e-91
whkp_1030_d08f 2012 5' Shoot grown under continuous light 778bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whkp_1030_d08r 2012 3' Shoot grown under continuous light 680bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.14084e-92
whkp_5045_d09f 2012 5' Shoot grown under continuous light 714bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whkp_5045_d09r 2012 3' Shoot grown under continuous light 667bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.06092e-84
whkp_13046_d11f 2012 5' Shoot grown under continuous light 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whkp_13046_d11r 2012 3' Shoot grown under continuous light 503bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 311 4.60126e-83
whkp_6061_d14f 2012 5' Shoot grown under continuous light 610bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 257 2.27962e-66
whkp_6061_d14r 2012 3' Shoot grown under continuous light 577bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 277 1.82436e-72
whkp_20093_d21f 2012 5' Shoot grown under continuous light 761bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whkp_20093_d21r 2012 3' Shoot grown under continuous light 691bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.25835e-91
whkp_7093_d21r 2012 3' Shoot grown under continuous light 687bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whkp_12094_d23f 2012 5' Shoot grown under continuous light 50bp Contig7252            
whkp_4012_e03f 2012 5' Shoot grown under continuous light 768bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whkp_4012_e03r 2012 3' Shoot grown under continuous light 678bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.23749e-89
whkp_13027_f06r 2012 3' Shoot grown under continuous light 630bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 299 4.41759e-79
whkp_8059_f14f 2012 5' Shoot grown under continuous light 717bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whkp_16076_f19f 2012 5' Shoot grown under continuous light 320bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000115084
whkp_16076_f19r 2012 3' Shoot grown under continuous light 312bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.6181e-11
whkp_1091_f22f 2012 5' Shoot grown under continuous light 707bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whkp_1091_f22r 2012 3' Shoot grown under continuous light 691bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 6.24512e-91
whkp_20090_g24f 2012 5' Shoot grown under continuous light 684bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 320 2.22522e-85
whkp_20090_g24r 2012 3' Shoot grown under continuous light 474bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 227 8.87079e-58
whkp_17042_h12f 2012 5' Shoot grown under continuous light 711bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whkp_17042_h12r 2012 3' Shoot grown under continuous light 665bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.18167e-90
whkp_13073_h17f 2012 5' Shoot grown under continuous light 691bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whkp_13073_h17r 2012 3' Shoot grown under continuous light 687bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whkp_17073_h18f 2012 5' Shoot grown under continuous light 776bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.90937e-98
whkp_17073_h18r 2012 3' Shoot grown under continuous light 686bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 331 1.66452e-88
whkp_10024_i08f 2012 5' Shoot grown under continuous light 767bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whkp_10024_i08r 2012 3' Shoot grown under continuous light 674bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whkp_1039_i09f 2012 5' Shoot grown under continuous light 689bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whkp_1039_i09r 2012 3' Shoot grown under continuous light 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 335 9.11386e-90
whkp_20039_i10f 2012 5' Shoot grown under continuous light 710bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whkp_20039_i10r 2012 3' Shoot grown under continuous light 689bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.3479e-90
whkp_9008_j03f 2012 5' Shoot grown under continuous light 755bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whkp_9008_j03r 2012 3' Shoot grown under continuous light 699bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 342 5.82874e-92
whkp_14088_j23f 2012 5' Shoot grown under continuous light 449bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.13466e-28
whkp_14088_j23r 2012 3' Shoot grown under continuous light 439bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 159 3.81838e-37
whkp_17005_k01f 2012 5' Shoot grown under continuous light 186bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 4.6791e-30
whkp_7022_k07f 2012 5' Shoot grown under continuous light 696bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.57078e-89
whkp_7022_k07r 2012 3' Shoot grown under continuous light 707bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.86652e-94
whkp_2053_k13f 2012 5' Shoot grown under continuous light 688bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whkp_2053_k13r 2012 3' Shoot grown under continuous light 680bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.12766e-89
whkp_20054_k15f 2012 5' Shoot grown under continuous light 709bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.76122e-89
whkp_20054_k15r 2012 3' Shoot grown under continuous light 635bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.26784e-85
whkp_20069_k18f 2012 5' Shoot grown under continuous light 700bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whkp_20069_k18r 2012 3' Shoot grown under continuous light 647bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 175 1.33389e-41
whkp_5006_l03r 2012 3' Shoot grown under continuous light 42bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit,partial(chloroplast)[Panicumvirgatum] 35 4.42159
whkp_15038_l11f 2012 5' Shoot grown under continuous light 573bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 229 3.28264e-58
whkp_15038_l11r 2012 3' Shoot grown under continuous light 561bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 257 1.82762e-66
whkp_16053_l14f 2012 5' Shoot grown under continuous light 766bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whkp_16053_l14r 2012 3' Shoot grown under continuous light 656bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.56054e-84
whkp_17069_l18f 2012 5' Shoot grown under continuous light 784bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.00711e-98
whkp_17069_l18r 2012 3' Shoot grown under continuous light 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whkp_8085_l22f 2012 5' Shoot grown under continuous light 786bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.03968e-98
whkp_8085_l22r 2012 3' Shoot grown under continuous light 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whkp_15086_l24f 2012 5' Shoot grown under continuous light 724bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whkp_15086_l24r 2012 3' Shoot grown under continuous light 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whkp_7004_m03f 2012 5' Shoot grown under continuous light 695bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkp_7004_m03r 2012 3' Shoot grown under continuous light 677bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.09483e-92
whkp_10020_m07f 2012 5' Shoot grown under continuous light 696bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkp_16020_m07f 2012 5' Shoot grown under continuous light 758bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whkp_16020_m07r 2012 3' Shoot grown under continuous light 703bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.81737e-94
whkp_10035_m10f 2012 5' Shoot grown under continuous light 779bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.35834e-97
whkp_10035_m10r 2012 3' Shoot grown under continuous light 710bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 338 1.13325e-90
whkp_3036_m11r 2012 3' Shoot grown under continuous light 43bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit,partial(chloroplast)[Panicumvirgatum] 36 1.63658
whkp_1067_m18f 2012 5' Shoot grown under continuous light 722bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 7.06358e-80
whkp_1068_m19r 2012 3' Shoot grown under continuous light 121bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 5.47249e-15
whkp_10084_m24f 2012 5' Shoot grown under continuous light 692bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whkp_10084_m24r 2012 3' Shoot grown under continuous light 684bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whkp_19003_n02f 2012 5' Shoot grown under continuous light 712bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.28962e-98
whkp_19003_n02r 2012 3' Shoot grown under continuous light 674bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.53855e-91
whkp_1036_n11r 2012 3' Shoot grown under continuous light 55bp Contig7252       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 43 0.0172132
whkp_18052_n15f 2012 5' Shoot grown under continuous light 608bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 312 4.57201e-83
whkp_18052_n15r 2012 3' Shoot grown under continuous light 507bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 5.04208e-85
whkp_1052_n16f 2012 5' Shoot grown under continuous light 695bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whkp_1052_n16r 2012 3' Shoot grown under continuous light 676bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.09483e-92
whkp_1034_o11f 2012 5' Shoot grown under continuous light 713bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whkp_1034_o11r 2012 3' Shoot grown under continuous light 697bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 335 9.11386e-90
whkp_5050_o15f 2012 5' Shoot grown under continuous light 727bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 324 2.28902e-86
whkp_5050_o15r 2012 3' Shoot grown under continuous light 695bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whkp_3065_o18f 2012 5' Shoot grown under continuous light 714bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whkp_7065_o18f 2012 5' Shoot grown under continuous light 360bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.59226e-12
whkp_3065_o18r 2012 3' Shoot grown under continuous light 691bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.32488e-92
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