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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 18
First Previous 1-18 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_6006_k04r 2012 3' Callus 765bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 463 2.0722e-128
whcs_6021_k06f 2012 5' Callus 646bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 1.87752e-115
whcs_6021_k06r 2012 3' Callus 745bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 451 1.0146e-124
whvs_16027_e05f 2012 5' Liquid cultured tissue 412bp Contig10958       PREDICTED:probablecellulosesynthaseAcatalyticsubunit2[UDP-forming]-like[Brachypodiumdistachyon] 80 1.73567e-13
whvs_16027_e05r 2012 3' Liquid cultured tissue 381bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 4.60285e-14
whxd_8083_m21r 2012 3' Root, treated at 50 microM Al for 6h 555bp Contig10958       Os09g0460000[OryzasativaJaponicaGroup] 220 1.82547e-55
HX021427 whxk_6046_c12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 372bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 3.66272e-51
HX031516 whxl_3014_c03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 434bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 300 1.39787e-79
HX031517 whxl_4014_c03f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 386bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 4.5106e-70
HX031529 whxl_3014_c03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 476bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 5.33289e-71
HX031530 whxl_4014_c03r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 463bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 1.43945e-68
HX044670 whxm_17025_h06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 259bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 5.48247e-31
HX072013 whxo_18016_a04f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 670bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 458 6.56859e-127
HX072028 whxo_18016_a04r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 543bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 181 1.15958e-77
HX084682 whxo_24082_p23r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 522bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 314 1.00794e-83
HX116530 whxq_10071_i18f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 691bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 472 6.17311e-131
HX116553 whxq_10071_i18r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 596bp Contig10958       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.40607e-97
HX169831 whxt_21044_f11r 2012 3' Roots, 18 day old plants were grown hydroponically 711bp Contig10958       Os09g0460000[OryzasativaJaponicaGroup] 214 3.20783e-53
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