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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 24
First Previous 1-24 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ645285 whei1g23 2003 5' Dormant seed with water absorption after breaking 680bp whei1g23 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 334 1.27507e-29
CJ651900 whem6p15 2003 5' Dormant seed with water absorption 693bp Wh_EM_all.Contig762 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 672 8.59499e-69
CJ543971 rwhem6p15 2003 3' Dormant seed with water absorption 743bp Wh_EM_all.Contig762 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 307 2.07267e-26
CJ656644 whgc7h14 2003 5' Anther at meiosis of DT4B CS wheat 705bp Wh_GCPCDAM_all.Contig1936 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 761 4.23465e-79
CJ653125 whgc12e15 2003 5' Anther at meiosis of DT4B CS wheat 623bp Wh_GCPCDAM_all.Contig1936 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 903 1.11066e-95
CJ548916 rwhgc7h14 2003 3' Anther at meiosis of DT4B CS wheat 785bp Wh_GCPCDAM_all.Contig1936 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 637 1.24436e-64
CJ545236 rwhgc12e15 2003 3' Anther at meiosis of DT4B CS wheat 774bp Wh_GCPCDAM_all.Contig1936 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 610 1.62966e-61
CJ661679 whkp10b07 2003 5' Shoot grown under continuous light 220bp Wh_KMP_all.Contig1899 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       envelope glycoprotein [Human immunodeficiency virus type 1] 73 9.57017
CJ666558 whkp7l16 2003 5' Shoot grown under continuous light 632bp Wh_KMP_all.Contig1899 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 893 1.63683e-94
CJ559294 rwhkp7l16 2003 3' Shoot grown under continuous light 878bp Wh_KMP_all.Contig1899 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 694 3.31995e-71
CJ672972 whms11n16 2003 5' Seed DPA5 of DT3DL CS wheat 690bp whms11n16 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 755 2.0208e-78
CJ565954 rwhms11n16 2003 3' Seed DPA5 of DT3DL CS wheat 710bp rwhms11n16 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 316 1.69689e-27
CJ686064 whpc4a23 2003 5' Anther at meiosis 792bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 986 4.29305e-105
CJ683633 whpc13f17 2003 5' Anther at meiosis 813bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 1093 1.783e-117
CJ683634 whpc13f18 2003 5' Anther at meiosis 734bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 1037 4.53747e-111
CJ579526 rwhpc4a23 2003 3' Anther at meiosis 858bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 918 3.80496e-97
CJ577000 rwhpc13f17 2003 3' Anther at meiosis 842bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 610 1.9075e-61
CJ577001 rwhpc13f18 2003 3' Anther at meiosis 865bp Wh_PCDAM_all.Contig1862 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 581 4.63683e-58
CJ696653 whsc5j10 2003 5' Shoot grown with cold treatment 794bp Wh_SHC_all.Contig837 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 838 7.924e-95
CJ590566 rwhsc5j10 2003 3' Shoot grown with cold treatment 825bp Wh_SHC_all.Contig837 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       hypothetical protein OsJ_025955 [Oryza sativa (japonica cultivar-group)] 400 1.8385e-55
CJ712745 whva15i04 2003 5' Shoot with ABA treatment 806bp whva15i04 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 971 2.44559e-103
CJ608059 rwhva15i04 2003 3' Shoot with ABA treatment 871bp rwhva15i04 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 264 2.69178e-21
CJ718197 whvd18n22 2003 5' Shoot grown with dessication 444bp whvd18n22 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os09g0308900 [Oryza sativa (japonica cultivar-group)] 635 6.68668e-65
CJ614035 rwhvd18n22 2003 3' Shoot grown with dessication 770bp rwhvd18n22 MUGEST2003_all.Contig24098 MUGEST2003_all.Contig24098       Os08g0359200 [Oryza sativa (japonica cultivar-group)] 602 1.36855e-60
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