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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 56
First Previous 1-56 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_21084_f18f 2012 5' Crown of seedling 562bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.68362e-67
whdl_21084_f18r 2012 3' Crown of seedling 471bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33149e-53
whdl_16094_l18r 2012 3' Crown of seedling 481bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.22083e-68
whei_20088_i23f 2012 5' Dormant seed with water absorption after breaking 425bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 1.79506e-66
whei_20088_i23r 2012 3' Dormant seed with water absorption after breaking 571bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.56993e-68
whei_20088_i24r 2012 3' Dormant seed with water absorption after breaking 541bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.96598e-68
whem_20015_a02f 2012 5' Dormant seed with water absorption 576bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.6501e-68
whem_20015_a02r 2012 3' Dormant seed with water absorption 554bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.18892e-68
whem_11019_m06f 2012 5' Dormant seed with water absorption 417bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.30515e-61
whem_11019_m06r 2012 3' Dormant seed with water absorption 556bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.26948e-68
whhg_18016_b04f 2012 5' Anther at meiosis of MT4B CS wheat 651bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.43222e-68
whhg_18016_b04r 2012 3' Anther at meiosis of MT4B CS wheat 606bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.42587e-68
whms_15062_c15f 2012 5' Seed DPA5 of DT3DL CS wheat 646bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.35281e-68
whms_15062_c15r 2012 3' Seed DPA5 of DT3DL CS wheat 541bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.96598e-68
whoh_11101_p24r 2012 3' Pistil at heading date 117bp Contig8623            
whsc_12015_b01r 2012 3' Shoot grown with cold treatment 560bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.35004e-68
whv3_7078_d19f 2012 5' Shoot grown under cold condition for 3days 523bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.29477e-59
whv3_7078_d19r 2012 3' Shoot grown under cold condition for 3days 632bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.95576e-68
whv3_4026_h08f 2012 5' Shoot grown under cold condition for 3days 532bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.51861e-53
whv3_4026_h08r 2012 3' Shoot grown under cold condition for 3days 494bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.32398e-53
whv3_4074_h19f 2012 5' Shoot grown under cold condition for 3days 399bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 3.29696e-44
whv3_4074_h19r 2012 3' Shoot grown under cold condition for 3days 494bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.32398e-53
whvd_4028_e08f 2012 5' Shoot grown with dessication 594bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.13115e-68
whvd_4028_e08r 2012 3' Shoot grown with dessication 565bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.51115e-68
whvs_10064_b15f 2012 5' Liquid cultured tissue 637bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.03517e-68
whvs_17013_c01f 2012 5' Liquid cultured tissue 679bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 7.11253e-68
whvs_17013_c01r 2012 3' Liquid cultured tissue 633bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.03517e-68
whxa_3047_b10r 2012 3' Root 62bp Contig8623       hydroxyprolinerichglycoproteinPsHRGP1,partial[Pisumsativum] 37 1.04947
whxa_26026_g07f 2012 5' Root 665bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.82927e-68
whxa_26026_g07r 2012 3' Root 556bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.26948e-68
whxa_11055_i13f 2012 5' Root 404bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 5.04227e-61
whxa_11055_i13r 2012 3' Root 620bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.74504e-68
whxa_11055_i14r 2012 3' Root 67bp Contig8623       hydroxyprolinerichglycoproteinPsHRGP1,partial[Pisumsativum] 44 0.00901445
whxa_11007_j01r 2012 3' Root 585bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.89063e-68
whxa_28018_o08f 2012 5' Root 693bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 5.52198e-55
whxa_28018_o08r 2012 3' Root 636bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 1.19888e-47
whxb_26078_c19f 2012 5' Root 162bp Contig8623            
whxb_26078_c19r 2012 3' Root 137bp Contig8623            
whxb_9077_d18f 2012 5' Root 563bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 3.29342e-55
whxb_9077_d18r 2012 3' Root 315bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.07635e-23
whxb_15049_p14f 2012 5' Root 112bp Contig8623            
whxb_15049_p14r 2012 3' Root 88bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 8.40386
whxc_35031_a06f 2012 5' Root, treated at 50 microM Al for 6h 562bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.35004e-68
whxc_35031_a06r 2012 3' Root, treated at 50 microM Al for 6h 587bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.9708e-68
whxd_36047_a10f 2012 5' Root, treated at 50 microM Al for 6h 546bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 3.46599e-56
whxd_36047_a10r 2012 3' Root, treated at 50 microM Al for 6h 495bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 2.85023e-56
whxd_1090_g24f 2012 5' Root, treated at 50 microM Al for 6h 322bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.10283e-23
whxd_1090_g24r 2012 3' Root, treated at 50 microM Al for 6h 315bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 127 1.22865e-27
whxd_1017_o05f 2012 5' Root, treated at 50 microM Al for 6h 636bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 6.03517e-68
whxd_1017_o05r 2012 3' Root, treated at 50 microM Al for 6h 598bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 5.18649e-68
HX112836 whxq_20043_f09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 462bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 147 1.15117e-33
HX112837 whxq_21043_f09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 391bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 6.55149e-21
HX112861 whxq_20043_f09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 423bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.5329e-44
HX112862 whxq_21043_f09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 422bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.5329e-44
whyd_23071_m11f 2012 5' Spikelet at late flowering 545bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.94726e-68
whyd_23071_m11r 2012 3' Spikelet at late flowering 489bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33614e-53
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